| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875144
Identifier: 160875144
GI number: 160875144
Start: 2403617
End: 2403976
Strand: Direct
Name: 160875144
Synonym: Sbal195_2030
Alternate gene names: NA
Gene position: 2403617-2403976 (Clockwise)
Preceding gene: 160875143
Following gene: 160875145
Centisome position: 44.95
GC content: 52.5
Gene sequence:
>360_bases ATGGGCTTTAGCGATGAACCCGAGCAGAGGATGAACATTAAGGCGTTGCGGCTAGGGCTTTATCGCTGGGGCCGGTATTG GGTGCACCAAGAGTTAGGCAAGGGGTTTTCGAACCGCAGCGCCTGCGACCGCTTAGGTGAAGCCTTGGGCGGCGGCAACT TAAAGCACGAACTTAACGTGCCTGCCCATGTCGCGCATTATGACCAGCTCGTTGAGCAGTTATCCATAAACTGCAAACGC GCCATCCGCGCCCATTACCTGTGCAAAGAGCAGTGGGCCTTAATGGGATTTGACAGCAAAAAGTCTTACATCTTCTGGCT AAGAAAAGCCGAAATGGCACTACTGGATAGGATGAATTAG
Upstream 100 bases:
>100_bases CGTTGGGAAAATGGCCGTACTACTGCGCCCTATGACGATGTGACATCGATATGCATTGATGTGTTTAAGCTTTCCATCGA GAAGATAAATGAGGTGGCCA
Downstream 100 bases:
>100_bases AAGGATGTTTAGTGGTGGCTTGGGGAGCGAGAAGATCAAGGGAAGGGGATTGAATATCGAGGCCGCAGTAGCGGCCTTTT TGTTGGGAGGGATGATCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MGFSDEPEQRMNIKALRLGLYRWGRYWVHQELGKGFSNRSACDRLGEALGGGNLKHELNVPAHVAHYDQLVEQLSINCKR AIRAHYLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN
Sequences:
>Translated_119_residues MGFSDEPEQRMNIKALRLGLYRWGRYWVHQELGKGFSNRSACDRLGEALGGGNLKHELNVPAHVAHYDQLVEQLSINCKR AIRAHYLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN >Mature_118_residues GFSDEPEQRMNIKALRLGLYRWGRYWVHQELGKGFSNRSACDRLGEALGGGNLKHELNVPAHVAHYDQLVEQLSINCKRA IRAHYLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13884; Mature: 13753
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFSDEPEQRMNIKALRLGLYRWGRYWVHQELGKGFSNRSACDRLGEALGGGNLKHELNV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCC PAHVAHYDQLVEQLSINCKRAIRAHYLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCC >Mature Secondary Structure GFSDEPEQRMNIKALRLGLYRWGRYWVHQELGKGFSNRSACDRLGEALGGGNLKHELNV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEECCC PAHVAHYDQLVEQLSINCKRAIRAHYLCKEQWALMGFDSKKSYIFWLRKAEMALLDRMN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA