| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875117
Identifier: 160875117
GI number: 160875117
Start: 2386259
End: 2387809
Strand: Reverse
Name: 160875117
Synonym: Sbal195_2003
Alternate gene names: NA
Gene position: 2387809-2386259 (Counterclockwise)
Preceding gene: 160875118
Following gene: 160875116
Centisome position: 44.65
GC content: 52.87
Gene sequence:
>1551_bases ATGCGAGGCTTAATCGTCGATAATTTTGCAGGCGGTGGCGGTGCAAGTACGGGCATAGCGTGGGCGATTGGTCGCAGTGT GGATATTGCCATTAACCATGACCCTGACGCCATTGCGATGCATTCAGCAAATCACCCAGAGACCTTGCACTACTGCGAGT CGGTATTTGATATCGACCCCGTGCAAGCTACGGCAGGTAAGCCAGTTGATTTAGCTTGGTTCTCACCCGACTGCAAACAC TTCTCAAAAGCCAAAGGCAGTAAGCCCGTGAGTAAAGAGATCCGCGGCTTGGCTTGGGTGACGGTTCGCTGGGCGATGAT GGTTCGGCCGCGCGTGTTGATGCTTGAGAATGTTGAAGAATTTAAAACGTGGGGGCCTGTTATTGAATGCCCAGTCACGG AGGCGATGCGCCCCTGCCCTGAGCGCAAAGGCGAAACCTTTAACGCCTTTGTCAGTATGTTGAGCACTGGCATAGATGCA GAGCACCCCGCACTTGCTGAGTGCGTCGAAACATTAGGCTTGCTCGATACCGCTAAACTGATGAAAGGACTGGGTTATAA GGTGGAGTGGCGCGAACTACGTGCCTGTGACTTCGGCGCCCCGACTATTCGCAAACGGCTATTTATGATCGCCCGTTGTG ATGGCCAGCCCATCATTTGGCCTGAGCCGACCCACGGCGCACCCAATAGCGAAGCGGTTAAATCGGGCAAGCTGCAACCT TGGCGAACGGCGGCTGAATGCATCGACTGGTCACTGCCTTGCCGATCCATCTTTGGCCGTAAAAAACCGTTGGCTGAAAA CACCATGAAGCGCATTGCTAAAGGGATTCAAAAGTTTGTGTTTGATGCCAAGGAGCCGTTTATCGTTCCGCAAAATGTCA CGTTAGCCCCTTTTATTACTGAACACGCGAATGCCAGTAATCAACGCAATATGCCCGTTGATGAACCCTTGCGCACGATA TGCGCCCAAGTAAAAGGCGGTCACTTTGCAGTGGTGCAACCGGTACTAGCGGCGGCCAATATCTGCAAGCATTACGGCGG CAATTACTCGGGACCAGGTGACGACCTAAATAATCCCTTACCGACGGTGACAACGGTTGATCACAACGCGCTGATCACCA GCCACATGATTAAATTGCGTGGTACTAACCTCGGCTTTGCAATGGATGAACCCGCACACACGATCACCGCTGGCGGCTTA CACCTCGGCGAAGTGCGCGCGTTCTTCATCAAATACTACGGCAACGAGCAAGACGGCGTGGCATGTAACGAACCATTGCA CACTATCACCACCAATGACCGCTTTGGCCTAGTGATGATCAAGGGTGAGCCCTATCAAATCATCGATATTGGTATGCGCA TGCTCGAACCCCATGAGCTGTTCGCCTGCCAAGGTTTCAATCCTGAATACATTATCAGTAACTACAACGGCAAATCGACC AAGAAACAGCAAGTCGCCCGTGTGGGTAACAGCGTTCCGCCCCCATTTGCCGAAGCACTCACCCGCGCAAATCTCCCAGA GCTTTGCATACACACCGCCGAAGCGGCATAG
Upstream 100 bases:
>100_bases AGTCTTTTAACGCCATCGAGTGCAGCGACTTCGGCCAAGCCGACGCCGAAGTATTCGCACTCAACGCAGAATCAAAACTC AGGATAAAAGGAGAAGCAGC
Downstream 100 bases:
>100_bases GAGTTTTTATGAACCCGATACAAGCAGCAACTGTAGAACGTGAAGAAGGTTATTGGACCCATCCAGATTTGCCCGAGTGG GATGAAGGAGTGACCCGCGT
Product: C-5 cytosine-specific DNA methylase
Products: NA
Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; Cytosine-Specific Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; DNA Cytosine-Specific Methylase; Prophage LambdaSo Type II DNA Methyltransferase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Methylase; DNA Cytosine Methyltransferase Family Protein; C-5 Cytosine-Specific DNA Methylase Superfamily; Type II Restriction- System DNA Cytosine-Specific Methylase
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MRGLIVDNFAGGGGASTGIAWAIGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPVQATAGKPVDLAWFSPDCKH FSKAKGSKPVSKEIRGLAWVTVRWAMMVRPRVLMLENVEEFKTWGPVIECPVTEAMRPCPERKGETFNAFVSMLSTGIDA EHPALAECVETLGLLDTAKLMKGLGYKVEWRELRACDFGAPTIRKRLFMIARCDGQPIIWPEPTHGAPNSEAVKSGKLQP WRTAAECIDWSLPCRSIFGRKKPLAENTMKRIAKGIQKFVFDAKEPFIVPQNVTLAPFITEHANASNQRNMPVDEPLRTI CAQVKGGHFAVVQPVLAAANICKHYGGNYSGPGDDLNNPLPTVTTVDHNALITSHMIKLRGTNLGFAMDEPAHTITAGGL HLGEVRAFFIKYYGNEQDGVACNEPLHTITTNDRFGLVMIKGEPYQIIDIGMRMLEPHELFACQGFNPEYIISNYNGKST KKQQVARVGNSVPPPFAEALTRANLPELCIHTAEAA
Sequences:
>Translated_516_residues MRGLIVDNFAGGGGASTGIAWAIGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPVQATAGKPVDLAWFSPDCKH FSKAKGSKPVSKEIRGLAWVTVRWAMMVRPRVLMLENVEEFKTWGPVIECPVTEAMRPCPERKGETFNAFVSMLSTGIDA EHPALAECVETLGLLDTAKLMKGLGYKVEWRELRACDFGAPTIRKRLFMIARCDGQPIIWPEPTHGAPNSEAVKSGKLQP WRTAAECIDWSLPCRSIFGRKKPLAENTMKRIAKGIQKFVFDAKEPFIVPQNVTLAPFITEHANASNQRNMPVDEPLRTI CAQVKGGHFAVVQPVLAAANICKHYGGNYSGPGDDLNNPLPTVTTVDHNALITSHMIKLRGTNLGFAMDEPAHTITAGGL HLGEVRAFFIKYYGNEQDGVACNEPLHTITTNDRFGLVMIKGEPYQIIDIGMRMLEPHELFACQGFNPEYIISNYNGKST KKQQVARVGNSVPPPFAEALTRANLPELCIHTAEAA >Mature_516_residues MRGLIVDNFAGGGGASTGIAWAIGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDPVQATAGKPVDLAWFSPDCKH FSKAKGSKPVSKEIRGLAWVTVRWAMMVRPRVLMLENVEEFKTWGPVIECPVTEAMRPCPERKGETFNAFVSMLSTGIDA EHPALAECVETLGLLDTAKLMKGLGYKVEWRELRACDFGAPTIRKRLFMIARCDGQPIIWPEPTHGAPNSEAVKSGKLQP WRTAAECIDWSLPCRSIFGRKKPLAENTMKRIAKGIQKFVFDAKEPFIVPQNVTLAPFITEHANASNQRNMPVDEPLRTI CAQVKGGHFAVVQPVLAAANICKHYGGNYSGPGDDLNNPLPTVTTVDHNALITSHMIKLRGTNLGFAMDEPAHTITAGGL HLGEVRAFFIKYYGNEQDGVACNEPLHTITTNDRFGLVMIKGEPYQIIDIGMRMLEPHELFACQGFNPEYIISNYNGKST KKQQVARVGNSVPPPFAEALTRANLPELCIHTAEAA
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56660; Mature: 56660
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLIVDNFAGGGGASTGIAWAIGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDP CCCEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC VQATAGKPVDLAWFSPDCKHFSKAKGSKPVSKEIRGLAWVTVRWAMMVRPRVLMLENVEE CHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHH FKTWGPVIECPVTEAMRPCPERKGETFNAFVSMLSTGIDAEHPALAECVETLGLLDTAKL HHHCCCEEECCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH MKGLGYKVEWRELRACDFGAPTIRKRLFMIARCDGQPIIWPEPTHGAPNSEAVKSGKLQP HHHCCCEEEHHHHHHCCCCCHHHHHHEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCC WRTAAECIDWSLPCRSIFGRKKPLAENTMKRIAKGIQKFVFDAKEPFIVPQNVTLAPFIT HHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEECCHHH EHANASNQRNMPVDEPLRTICAQVKGGHFAVVQPVLAAANICKHYGGNYSGPGDDLNNPL HCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTVTTVDHNALITSHMIKLRGTNLGFAMDEPAHTITAGGLHLGEVRAFFIKYYGNEQDGV CCEEECCCCHHHHHHEEEEECCCCCCEECCCCCEEEECCEEHHHHHEEEHHEECCCCCCC ACNEPLHTITTNDRFGLVMIKGEPYQIIDIGMRMLEPHELFACQGFNPEYIISNYNGKST CCCCCCEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCCEEEECCCCCCH KKQQVARVGNSVPPPFAEALTRANLPELCIHTAEAA HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure MRGLIVDNFAGGGGASTGIAWAIGRSVDIAINHDPDAIAMHSANHPETLHYCESVFDIDP CCCEEEECCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC VQATAGKPVDLAWFSPDCKHFSKAKGSKPVSKEIRGLAWVTVRWAMMVRPRVLMLENVEE CHHCCCCCEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHH FKTWGPVIECPVTEAMRPCPERKGETFNAFVSMLSTGIDAEHPALAECVETLGLLDTAKL HHHCCCEEECCHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHH MKGLGYKVEWRELRACDFGAPTIRKRLFMIARCDGQPIIWPEPTHGAPNSEAVKSGKLQP HHHCCCEEEHHHHHHCCCCCHHHHHHEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCC WRTAAECIDWSLPCRSIFGRKKPLAENTMKRIAKGIQKFVFDAKEPFIVPQNVTLAPFIT HHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEECCHHH EHANASNQRNMPVDEPLRTICAQVKGGHFAVVQPVLAAANICKHYGGNYSGPGDDLNNPL HCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PTVTTVDHNALITSHMIKLRGTNLGFAMDEPAHTITAGGLHLGEVRAFFIKYYGNEQDGV CCEEECCCCHHHHHHEEEEECCCCCCEECCCCCEEEECCEEHHHHHEEEHHEECCCCCCC ACNEPLHTITTNDRFGLVMIKGEPYQIIDIGMRMLEPHELFACQGFNPEYIISNYNGKST CCCCCCEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCCEEEECCCCCCH KKQQVARVGNSVPPPFAEALTRANLPELCIHTAEAA HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA