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The map label for this gene is intA [C]

Identifier: 160875093

GI number: 160875093

Start: 2355555

End: 2356823

Strand: Direct

Name: intA [C]

Synonym: Sbal195_1978

Alternate gene names: 160875093

Gene position: 2355555-2356823 (Clockwise)

Preceding gene: 160875092

Following gene: 160875094

Centisome position: 44.05

GC content: 53.03

Gene sequence:

>1269_bases
ATGGCGCAGATTGTGACAGCAACAGGCGTAGAGCAAGGCAAGTTAAACGATGCAGTATTGCGCCGTTGGTTGCGGGCAGG
GATAACGCGGGACTTTCGGGACACGCAGTTTCCGGCGGTGCGGTTACGGGCCTCGACCGATAGACGCCAAGCCTCAGTGT
ATTTAGTGATGAACGAGGCGGGCAAAACCGTGTGGCAAAAGCAGGGCGTGTGGCCAGTGATGTGCTTGAAGACTTTTTTA
ACCGAGTTACCCAGCCTGTTAGCCAAACGCAGTATGGGCCAAACGGTCATCAGCAACGAGTTTGCCACGGTCGCGCAATT
GCTGGCGTGGTTTGTAACCCATGTGGAATGCAACCGCACCTTAAGCAACAGCTGGCGCAGTAACTGTAAATCGTTAGTGA
GTAAGCATCTCAGCGGCTGCTTTGCTGAGTTACCACTCAATGAGCTGAACTTTATCGCGGTGGACAGTTATTTAATCAAA
CCCATGTTGGCGCAGGGCTATTCGGCCAATTACATCAAAGCCGCGGTGAAGGTATTAAAGCGGGCGTTATCGGTTGCGGC
CGATTTACGGGTGTTAGACACCAATAGCTTGGCGGGGTATCGGGTGCAAATGAGTTTGAAGATGCCGCCTTTGGTGGGCA
CGCAGTTAAGCGAGTCGGACGTGGGCCCGTTATTTAGCGCCCTACGAAATGCAGCAAGACCGGTAGCCATGTTGTTTGTG
TTGATGCTGATGTTCGGTACCCGCATCGGTGAAACCCGTTTAGCACGTTGGGACCACTTTGCCGGTGATTACTGGTTTAT
TCCTGCCGAGAATGCCAAGAACCGCCAAGAGCACCGACTGCCCATGACGCCCACAGCCAAGAAGCTGATAACCCATTATG
CCCACTGGCAATACACGCATGTGGGCAAGCGGGCGTTTTTGTTCCCAGGCGAAGTGGGGCCGGTGAGCATACGCACTGCG
CAGTATTGGAGTGAAACGATTCGGTTTAAGGCGTTTACATCGCATGCACTGCGCAAACTGTGCCGCACCATTATTGCCGA
CATGGGCGTAGACACCATGGTGGGTGAGCGGATTTTGAATCACACCTTGCCATTATTACTGCGTACTTACGTCAACAGCA
CCTTAGATAAGGGCATGTTGATGGCGTTGGATGCCTACCATGCACACTTAATCACGCTGGGGTTTGATGATGTGGCGCCT
GAGATTATGCGCCAATCGACCACTGAGACGAGTGAGCCAGACGAGCCAATGTTAGTGGGGTGGTTATGA

Upstream 100 bases:

>100_bases
AGCGTTAAGTGCGCGGTTTCGGGATATGCCGATTAACCAGCGGGTAAAGCGCATACGCTCGGGGACTCATCATACCTTTG
AATATCGGTTGGAGGGCTAG

Downstream 100 bases:

>100_bases
CGATGGCAACTAGAACAACTAGAACAACTAGAACAACTAGAACAACTGGGTTATGGCTGAGTACAGGAGGATTTATGGCT
AATCGCGCCGCGGATGTATT

Product: integrase family protein

Products: NA

Alternate protein names: Integrase Family Protein; Phage Integrase Family Protein; Phage Family Integrase

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAHWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTETSEPDEPMLVGWL

Sequences:

>Translated_422_residues
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFL
TELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIK
PMLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAHWQYTHVGKRAFLFPGEVGPVSIRTA
QYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAP
EIMRQSTTETSEPDEPMLVGWL
>Mature_421_residues
AQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEAGKTVWQKQGVWPVMCLKTFLT
ELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRTLSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKP
MLAQGYSANYIKAAVKVLKRALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFVL
MLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAHWQYTHVGKRAFLFPGEVGPVSIRTAQ
YWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILNHTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPE
IMRQSTTETSEPDEPMLVGWL

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47551; Mature: 47420

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
HHHHHHHCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAHWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCEEEE
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTETSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC
>Mature Secondary Structure 
AQIVTATGVEQGKLNDAVLRRWLRAGITRDFRDTQFPAVRLRASTDRRQASVYLVMNEA
CCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECC
GKTVWQKQGVWPVMCLKTFLTELPSLLAKRSMGQTVISNEFATVAQLLAWFVTHVECNRT
CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSNSWRSNCKSLVSKHLSGCFAELPLNELNFIAVDSYLIKPMLAQGYSANYIKAAVKVLK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
RALSVAADLRVLDTNSLAGYRVQMSLKMPPLVGTQLSESDVGPLFSALRNAARPVAMLFV
HHHHHHHCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH
LMLMFGTRIGETRLARWDHFAGDYWFIPAENAKNRQEHRLPMTPTAKKLITHYAHWQYTH
HHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCCCCHHHHHHHHHHCCEEEE
VGKRAFLFPGEVGPVSIRTAQYWSETIRFKAFTSHALRKLCRTIIADMGVDTMVGERILN
CCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
HTLPLLLRTYVNSTLDKGMLMALDAYHAHLITLGFDDVAPEIMRQSTTETSEPDEPMLVG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCEEEE
WL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA