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The map label for this gene is hlyB [H]

Identifier: 160875072

GI number: 160875072

Start: 2340853

End: 2342847

Strand: Direct

Name: hlyB [H]

Synonym: Sbal195_1957

Alternate gene names: 160875072

Gene position: 2340853-2342847 (Clockwise)

Preceding gene: 160875071

Following gene: 160875086

Centisome position: 43.78

GC content: 45.51

Gene sequence:

>1995_bases
ATGAAATGGCAATGGATTGGTAATCTCAGTCTAAAACAAAAATTATTAATGGTTGTCTTACCTCCCTTATTAGCCTGTTT
CCTCTGCGGTACATTATACCTCATTGAAAAATATGAATATAAGCAAGATTTAACCTTAGTGGTGCAACTGAGTGAGTTGG
CTGTAACAAACAGTAACTTAGTACACGAGTTACAAAAAGAGCGCGGAATGAGTGCAGGATTTATCGGCTCAGCAGGAAAA
GCCTTCGCCGGCAAAATACCAAGCCAAAGACAGTTAACGGATACGCAGCTTAGTCTCTATCAGCAATTTATCACTCAAAA
TCAGCTGCCAGCGATATTTGCTCCTAAACTTAAGGAACTTAATTCGCAGTTAGGGCGATTAAATTCAATTCGCTCACAGG
TGGACAATTTAACTATCAGCGTCGCCGATGAAGTCGCCTATTACACTGAGTTAAACAAATTGTTACTGGCGATAGTCGAT
GAAACCGCTAAAACTGGCGCTAACCAAGAAATCGCCATTAAAGCCGCAGCCTTTAGTGCCTTTTTGCAATTAAAGGAAAG
AGCAGGAATAGAAAGGGCGGTGTTAAGTTCAACATTCGGCCAAGCCGGATTTAAGCCAAAGGTTTACGCTAAATTTATTA
CCTTAGTGTCGGAGCAAAATACCTATCAAGAGCGGTTCTTAGCGCTAGCAGACTCAGATTTGTTAGTGGCATTTAACCGT
TTGCAGAGTTCTGCTGCAATGCACGATGTTGAGTTGTTACGCCAGCTTGCATTTGAACAAGACAATCAAAAAATCCAACA
ACAAAGTCCCGAAGACTGGTTCAGTAAATCAACCGCACGGATTGAGTTATTACGTGGATTTGAACAGCAAGTCTCGGCAG
ATTTACTCAATACCACCCATGAAAGATTATCCTTAGCAAATGAGAAAATGTTCTTAGTGCTCGCGACCTTAATCTCAGTG
TTAGCGATTGTGTTGATATTGAGTTTATCTGTGATCCGTTATTTGCACGATAGCGTGCATCACTTGTATTCGACCATCAC
GCAAGCCCGCAAACATTACGATTTAAGCGTGCGTTTGACTCAAACAAGCTCGGACGAGTTTGGTGAACTTGCCATCGCTT
TTAACGATATGATGATTGATTTTGAAAAGGTGATCTTGCATGTGCGTTCCAGCGGCGCAAAACTGCAACAAGCGGTGGCG
CAAATGGATGTTTGTACCCACGCCATGGAGCAAGATGTGATGGCGGGCCACAGCGAGGCAGAGCAAGTGGCTTCGGCGAT
GACTGAAATGAGTGCGACAGTGGCCGAGATTGCCAGCAATGCCGTGCAGGCATCCGAAGCGTCCTCCGCCGCCAATATAG
AGGCTAAAGAAGGTAACCTCGAAGTCGGCCGAACTAGTAAAGCGATCAAAGCCTTAGCCGATGATATCAGTGGAGCCTCT
AAAGCCATCAACGACTTAGACCGTGAAATTCATGGCATAGTGGTTGTGCTTGAGGTGATCAGCAGTATTGCAGAGCAAAC
CAATCTACTCGCACTCAATGCCGCGATTGAAGCCGCGCGAGCAGGGGAAATGGGCCGCGGCTTTGCCGTTGTTGCCGATG
AAGTCCGCAGTTTGGCACAGCGCTCACAAACCTCGACCTCTGATATTAAAAACATGACAGATAGATTGAAGGCAGGGGCG
AGCATTGCGGTAAAAGCCATGGACAGAGGCTTGGCGCAGGCGAATAACAGTGTTAATGAAGCCGAGCAAGCGGGCGTTGA
ACTGAAACGGATTGTGGAGCAAGTCGACATTATTGACCGCATGAACGAGCAAATTGCCACCGCAACCCACGAGCAATCGG
CCGTATCCGAAGACGTAAACCGTAATGCATTGAAGATCAGTGAGATTTACCTCAATACCCAAAGGATCTCCGATGAGCTT
AGGGAACTGACCAAAGCCCTGACGTTTGACGCGAATTTAATGTCAAAAGAAGTACACAAATTTACCGTCAATTAA

Upstream 100 bases:

>100_bases
CCTGAGTTTTCCCATAAGCCTTAGTCGTTATATGGTTAATCATATGCTATACCTAGTGTTTGGTTATTTGGTCTAACACT
AAATTTAAAAGGATATTTCT

Downstream 100 bases:

>100_bases
CGGTATAAAACGGTGAAAAGATTCAGGAAATGACGGCGGTTTGTTTAGCAATTGCGCAACTGCCTGAAACTGAGTCTTTT
TTACTTGACCCCCTTTAGGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 664; Mature: 664

Protein sequence:

>664_residues
MKWQWIGNLSLKQKLLMVVLPPLLACFLCGTLYLIEKYEYKQDLTLVVQLSELAVTNSNLVHELQKERGMSAGFIGSAGK
AFAGKIPSQRQLTDTQLSLYQQFITQNQLPAIFAPKLKELNSQLGRLNSIRSQVDNLTISVADEVAYYTELNKLLLAIVD
ETAKTGANQEIAIKAAAFSAFLQLKERAGIERAVLSSTFGQAGFKPKVYAKFITLVSEQNTYQERFLALADSDLLVAFNR
LQSSAAMHDVELLRQLAFEQDNQKIQQQSPEDWFSKSTARIELLRGFEQQVSADLLNTTHERLSLANEKMFLVLATLISV
LAIVLILSLSVIRYLHDSVHHLYSTITQARKHYDLSVRLTQTSSDEFGELAIAFNDMMIDFEKVILHVRSSGAKLQQAVA
QMDVCTHAMEQDVMAGHSEAEQVASAMTEMSATVAEIASNAVQASEASSAANIEAKEGNLEVGRTSKAIKALADDISGAS
KAINDLDREIHGIVVVLEVISSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRSQTSTSDIKNMTDRLKAGA
SIAVKAMDRGLAQANNSVNEAEQAGVELKRIVEQVDIIDRMNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDEL
RELTKALTFDANLMSKEVHKFTVN

Sequences:

>Translated_664_residues
MKWQWIGNLSLKQKLLMVVLPPLLACFLCGTLYLIEKYEYKQDLTLVVQLSELAVTNSNLVHELQKERGMSAGFIGSAGK
AFAGKIPSQRQLTDTQLSLYQQFITQNQLPAIFAPKLKELNSQLGRLNSIRSQVDNLTISVADEVAYYTELNKLLLAIVD
ETAKTGANQEIAIKAAAFSAFLQLKERAGIERAVLSSTFGQAGFKPKVYAKFITLVSEQNTYQERFLALADSDLLVAFNR
LQSSAAMHDVELLRQLAFEQDNQKIQQQSPEDWFSKSTARIELLRGFEQQVSADLLNTTHERLSLANEKMFLVLATLISV
LAIVLILSLSVIRYLHDSVHHLYSTITQARKHYDLSVRLTQTSSDEFGELAIAFNDMMIDFEKVILHVRSSGAKLQQAVA
QMDVCTHAMEQDVMAGHSEAEQVASAMTEMSATVAEIASNAVQASEASSAANIEAKEGNLEVGRTSKAIKALADDISGAS
KAINDLDREIHGIVVVLEVISSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRSQTSTSDIKNMTDRLKAGA
SIAVKAMDRGLAQANNSVNEAEQAGVELKRIVEQVDIIDRMNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDEL
RELTKALTFDANLMSKEVHKFTVN
>Mature_664_residues
MKWQWIGNLSLKQKLLMVVLPPLLACFLCGTLYLIEKYEYKQDLTLVVQLSELAVTNSNLVHELQKERGMSAGFIGSAGK
AFAGKIPSQRQLTDTQLSLYQQFITQNQLPAIFAPKLKELNSQLGRLNSIRSQVDNLTISVADEVAYYTELNKLLLAIVD
ETAKTGANQEIAIKAAAFSAFLQLKERAGIERAVLSSTFGQAGFKPKVYAKFITLVSEQNTYQERFLALADSDLLVAFNR
LQSSAAMHDVELLRQLAFEQDNQKIQQQSPEDWFSKSTARIELLRGFEQQVSADLLNTTHERLSLANEKMFLVLATLISV
LAIVLILSLSVIRYLHDSVHHLYSTITQARKHYDLSVRLTQTSSDEFGELAIAFNDMMIDFEKVILHVRSSGAKLQQAVA
QMDVCTHAMEQDVMAGHSEAEQVASAMTEMSATVAEIASNAVQASEASSAANIEAKEGNLEVGRTSKAIKALADDISGAS
KAINDLDREIHGIVVVLEVISSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQRSQTSTSDIKNMTDRLKAGA
SIAVKAMDRGLAQANNSVNEAEQAGVELKRIVEQVDIIDRMNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDEL
RELTKALTFDANLMSKEVHKFTVN

Specific function: May form a pore through which the hemolysin can be exported [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=336, Percent_Identity=29.1666666666667, Blast_Score=112, Evalue=9e-26,
Organism=Escherichia coli, GI1787690, Length=317, Percent_Identity=30.9148264984227, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1788195, Length=282, Percent_Identity=33.6879432624113, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788194, Length=242, Percent_Identity=33.4710743801653, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1789453, Length=343, Percent_Identity=26.2390670553936, Blast_Score=88, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR000727 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 73083; Mature: 73083

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50885 HAMP ; PS50906 NIT ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWQWIGNLSLKQKLLMVVLPPLLACFLCGTLYLIEKYEYKQDLTLVVQLSELAVTNSNL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHCCHHH
VHELQKERGMSAGFIGSAGKAFAGKIPSQRQLTDTQLSLYQQFITQNQLPAIFAPKLKEL
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NSQLGRLNSIRSQVDNLTISVADEVAYYTELNKLLLAIVDETAKTGANQEIAIKAAAFSA
HHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
FLQLKERAGIERAVLSSTFGQAGFKPKVYAKFITLVSEQNTYQERFLALADSDLLVAFNR
HHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
LQSSAAMHDVELLRQLAFEQDNQKIQQQSPEDWFSKSTARIELLRGFEQQVSADLLNTTH
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLSLANEKMFLVLATLISVLAIVLILSLSVIRYLHDSVHHLYSTITQARKHYDLSVRLT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QTSSDEFGELAIAFNDMMIDFEKVILHVRSSGAKLQQAVAQMDVCTHAMEQDVMAGHSEA
ECCCCCHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EQVASAMTEMSATVAEIASNAVQASEASSAANIEAKEGNLEVGRTSKAIKALADDISGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCHHH
KAINDLDREIHGIVVVLEVISSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RSQTSTSDIKNMTDRLKAGASIAVKAMDRGLAQANNSVNEAEQAGVELKRIVEQVDIIDR
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDELRELTKALTFDANLMSKEVHK
HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FTVN
HCCC
>Mature Secondary Structure
MKWQWIGNLSLKQKLLMVVLPPLLACFLCGTLYLIEKYEYKQDLTLVVQLSELAVTNSNL
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHCCHHH
VHELQKERGMSAGFIGSAGKAFAGKIPSQRQLTDTQLSLYQQFITQNQLPAIFAPKLKEL
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NSQLGRLNSIRSQVDNLTISVADEVAYYTELNKLLLAIVDETAKTGANQEIAIKAAAFSA
HHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH
FLQLKERAGIERAVLSSTFGQAGFKPKVYAKFITLVSEQNTYQERFLALADSDLLVAFNR
HHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHH
LQSSAAMHDVELLRQLAFEQDNQKIQQQSPEDWFSKSTARIELLRGFEQQVSADLLNTTH
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLSLANEKMFLVLATLISVLAIVLILSLSVIRYLHDSVHHLYSTITQARKHYDLSVRLT
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QTSSDEFGELAIAFNDMMIDFEKVILHVRSSGAKLQQAVAQMDVCTHAMEQDVMAGHSEA
ECCCCCHHHEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EQVASAMTEMSATVAEIASNAVQASEASSAANIEAKEGNLEVGRTSKAIKALADDISGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCHHH
KAINDLDREIHGIVVVLEVISSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRSLAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
RSQTSTSDIKNMTDRLKAGASIAVKAMDRGLAQANNSVNEAEQAGVELKRIVEQVDIIDR
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
MNEQIATATHEQSAVSEDVNRNALKISEIYLNTQRISDELRELTKALTFDANLMSKEVHK
HHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FTVN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2162464; 10952301 [H]