| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160875010
Identifier: 160875010
GI number: 160875010
Start: 2263781
End: 2264509
Strand: Direct
Name: 160875010
Synonym: Sbal195_1895
Alternate gene names: NA
Gene position: 2263781-2264509 (Clockwise)
Preceding gene: 160875009
Following gene: 160875011
Centisome position: 42.34
GC content: 50.21
Gene sequence:
>729_bases ATGCTTGAACATCAACAAAAGCCTCCCCGTTCTACCTCGCGATTTTCCTCTTCTAAATTAACAGGTTTAGCTGCCAGCGG TGTACCAAGCCGTGGCTTGTTTATCATCGAGCTGGTGGTGGCGTTACTCATCACTCGCATTCCCTATTTAAGCGTGCCGT TTAAATGGCTTGAAAGCTATTTCCATGAATTGTCCCACGGCATTGCGACGATATTAAGCTCGGGTGTGGTCAGCCATATT CAATTGTTTCCTAACGGCGCAGGCTTTTGTTTTAGCCAAGGCGGTTCGCCGATGTTGATTGGTTTTGCTGGCTATTTTGG CGCGGCCTGTTGGGGATATTTAATCTACTTGCTCGCGACTTGGCCAAAGGGGATCCGCGTGAGCTTTGCCTTGCTGGGCG CTTTAGTGGTGCTAAGCGGCTTGCTTTGGGGCCGAGATATCCTCACACTGGCGATTCTAGCCGTACTCACTATTATTTTG CTGTTACCGCTTAAACTCAGTCAAAACAAGATGTTGACCCAGTTTCTACGTATTATTGGCTTGATGATTATGCTCAATGC GCTGGCGAGTCCAACTGTGTTGCTCGGGCTTGATGGCCAAGGTGATGCGGTGATGTTGGCCGAGCGTTCTTGGATCCCCG CGTGGATTTGGGTGGGACTCTGGTTATTAACCAGTGCCTGCGCCTTGTATTTTGCGTGGCGCCGTGTCGATAACGCTGCG AGTCGCTAA
Upstream 100 bases:
>100_bases CAAGATACGCGTGGCCATCAGGGGGCGATAGCCCAATATTTACAAACTCAACATGCCGCCAAACGCGATGAAATTCAGCA AATGGTTGGCGTGGACTTGT
Downstream 100 bases:
>100_bases TCCTCAAGGTCATTTAATACCTCAGGCGTATTGTGTTTCCTCTGGCTTTTTTCCGCTTTGCGCTTTATTGGTTTGGATAA AGGTGAATTGACTCATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIIGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR
Sequences:
>Translated_242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIIGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR >Mature_242_residues MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESYFHELSHGIATILSSGVVSHI QLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLATWPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIIL LLPLKLSQNKMLTQFLRIIGLMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA SR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26433; Mature: 26433
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESY CCCCCCCCCCCHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHELSHGIATILSSGVVSHIQLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH WPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIILLLPLKLSQNKMLTQFLRIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA HHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SR CC >Mature Secondary Structure MLEHQQKPPRSTSRFSSSKLTGLAASGVPSRGLFIIELVVALLITRIPYLSVPFKWLESY CCCCCCCCCCCHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH FHELSHGIATILSSGVVSHIQLFPNGAGFCFSQGGSPMLIGFAGYFGAACWGYLIYLLAT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH WPKGIRVSFALLGALVVLSGLLWGRDILTLAILAVLTIILLLPLKLSQNKMLTQFLRIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LMIMLNALASPTVLLGLDGQGDAVMLAERSWIPAWIWVGLWLLTSACALYFAWRRVDNAA HHHHHHHHCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC SR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA