| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874995
Identifier: 160874995
GI number: 160874995
Start: 2248618
End: 2250240
Strand: Direct
Name: 160874995
Synonym: Sbal195_1880
Alternate gene names: NA
Gene position: 2248618-2250240 (Clockwise)
Preceding gene: 160874993
Following gene: 160874999
Centisome position: 42.05
GC content: 48.24
Gene sequence:
>1623_bases ATGATAATAACTTGGGAGAAAGTTGTGAAAAATATCATCTTAGCCACAAGTCTGATGGCCACTATCTCATTACCCGCCCT AGCTGAAACCACATTTGTGCAAAGCCTCGATCTCGCGCAATACCGAACCGATGTTAAAACCTTAGCCAGTGATGCCTTCG GTGGACGTGCGCCTTTATCAGAAGGTGAGAACTTAACTTTAGACTATTTAGTGAAAGCATTTAAAGATATGGGTCTCAAA CCCGGATTTGGCGACAGTTATCTGCAGGCCGTACCCTTGGCGCAAATTAGCGCAGATCAAAACATGCAGCTTGATATTGG CGGACTTAAATTTGCCAATGGCAGTGAATTTACCGCGAGAACCCAAAGAATCGCCGAAACCGTGAGCCTGAATAAAAGCG ATGTGGTGTTTGTCGGCTACGGGATCAACGCGCCCGAATATGGCTGGAATGATTACCAAGGGTTAGATGTAAAAGGCAAA ACCGTTATCGTGCTTGTGAATGATCCTGGCTTTGCGACTCAGGACCCTGCGGTATTTAAAGGCAATGCCATGACCTATTA CGGTCGCTGGACTTATAAGTATGAGGAAGCCGCGCGTCAAGGCGCCGAGGCTGTGTTTATTGTTCACGAAACTGCGCCTG CCGCCTATGGCTGGGGTGTGGTGCAAAACTCCAACACGGGCACTAAGTTCACTCTGGTCGATGCCAATAATAACCAAGGC CAAGTTGGCGTCATGGGTTGGGTACAGCACGAAACCGCGCAAAAAATCTTTACTAAAGCAGGATTGGATTTTGATACCTT AAAGCAGCAAGCTGCCAAGCCAAACTTTAAGGCGATCCCACTTAAGTTGAGCGCCCAGCTCACGTTAAACAATAAAATTG AACGCGCTGAGTCCCATAACGTTGCGGCTTTACTGCCTGGCAAAATGCGCCCCGACGAAGTGGTGATGATGCATGCCCAT TGGGATCATCTCGGTACTGTGATTGAAGACGGTAAGTCAGAGATTTTAAACGGAGCGGTCGATAATGCCAGCGGTGTGGC GGGGGTTTTAGCCTTGGCGCGTTACTTCAAACAGCAAGCCAAGACGGCGCCACTGGATCGCTCGGTGCTCTTCAGTGCCT TTACGGCGGAAGAAACCGGTCTGATTGGAGCGCAGCATTTTGCTCAGCATCCGAGTGTGCCAACGAAAAACATCGTCGCC TTTTTAAATATCGATGGCATGAATGTGAACAAGGGCGTGGATTACATTTTACGTTATGGCGAAGGCGTGTCTGAGTTAGA GCAATACTTAGACAAAGCCGCGAAGGCCCAAGACCGTTTAGTTAAAGGTGATCCAAGACCGCAGAATGGGTTGATGTTTA GATCGGACCACTTTGCGCTGGCACAACAAGGTGTACCTGGATTGCTATTTATGAGTCTTGGGGATACCGATCCTGATTAT ATCGCCCATAAATATCATAAGCCTGCTGACGATTATGATCCAAGCTGGAATTTAGGCGGTGTAAGCCAAGATCTAGACCT CATCGCCAGTATGATTGCCACCTTAGCCAATAGTACCGATTGGCCCCATTGGCTTGAGTCATCTGACTTTAAAGCCAAGC GCGAGCAAGATGGGCGTAAATAG
Upstream 100 bases:
>100_bases TGAACACCGTTTGTGCTTGGGCTGCAGCGACTCCGTTTGCGCTAAGACTTCCATCATAAACTAAAGATGATATGGTAAAG TCTATCCTTAAAATCAAATA
Downstream 100 bases:
>100_bases TGTTAATGAGTTGAATCATGAGGGCGCCAGTAGGTGCCCTTATTTTTTAACGCTGATTTTAGCTAGGATTTGGAAAATGG TTTTAGCTAGGCGTGGGCAA
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; LB Protein; Protein Containing Aminopeptidase Domain; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MIITWEKVVKNIILATSLMATISLPALAETTFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGENLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKMRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEGVSELEQYLDKAAKAQDRLVKGDPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMIATLANSTDWPHWLESSDFKAKREQDGRK
Sequences:
>Translated_540_residues MIITWEKVVKNIILATSLMATISLPALAETTFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGENLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKMRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEGVSELEQYLDKAAKAQDRLVKGDPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMIATLANSTDWPHWLESSDFKAKREQDGRK >Mature_540_residues MIITWEKVVKNIILATSLMATISLPALAETTFVQSLDLAQYRTDVKTLASDAFGGRAPLSEGENLTLDYLVKAFKDMGLK PGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTARTQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGK TVIVLVNDPGFATQDPAVFKGNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHNVAALLPGKMRPDEVVMMHAH WDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQAKTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVA FLNIDGMNVNKGVDYILRYGEGVSELEQYLDKAAKAQDRLVKGDPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY IAHKYHKPADDYDPSWNLGGVSQDLDLIASMIATLANSTDWPHWLESSDFKAKREQDGRK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59074; Mature: 59074
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIITWEKVVKNIILATSLMATISLPALAETTFVQSLDLAQYRTDVKTLASDAFGGRAPLS CEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EGENLTLDYLVKAFKDMGLKPGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTAR CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCEEECCCCCHHHH TQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGKTVIVLVNDPGFATQDPAVFK HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG CCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCC QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHN CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHCCCC VAALLPGKMRPDEVVMMHAHWDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQA EEEEECCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVAFLNIDGMNVNKGVDYILRYG CCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCC EGVSELEQYLDKAAKAQDRLVKGDPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHH IAHKYHKPADDYDPSWNLGGVSQDLDLIASMIATLANSTDWPHWLESSDFKAKREQDGRK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MIITWEKVVKNIILATSLMATISLPALAETTFVQSLDLAQYRTDVKTLASDAFGGRAPLS CEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EGENLTLDYLVKAFKDMGLKPGFGDSYLQAVPLAQISADQNMQLDIGGLKFANGSEFTAR CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCEEEECCEEECCCCCHHHH TQRIAETVSLNKSDVVFVGYGINAPEYGWNDYQGLDVKGKTVIVLVNDPGFATQDPAVFK HHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE GNAMTYYGRWTYKYEEAARQGAEAVFIVHETAPAAYGWGVVQNSNTGTKFTLVDANNNQG CCEEEEEEEEEEEHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCCCC QVGVMGWVQHETAQKIFTKAGLDFDTLKQQAAKPNFKAIPLKLSAQLTLNNKIERAESHN CEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEEEEEECCHHHHHCCCC VAALLPGKMRPDEVVMMHAHWDHLGTVIEDGKSEILNGAVDNASGVAGVLALARYFKQQA EEEEECCCCCCCCEEEEEECHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTAPLDRSVLFSAFTAEETGLIGAQHFAQHPSVPTKNIVAFLNIDGMNVNKGVDYILRYG CCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHCC EGVSELEQYLDKAAKAQDRLVKGDPRPQNGLMFRSDHFALAQQGVPGLLFMSLGDTDPDY CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHCCCCEEEEEECCCCCHHH IAHKYHKPADDYDPSWNLGGVSQDLDLIASMIATLANSTDWPHWLESSDFKAKREQDGRK HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA