| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874970
Identifier: 160874970
GI number: 160874970
Start: 2217103
End: 2218272
Strand: Direct
Name: 160874970
Synonym: Sbal195_1855
Alternate gene names: NA
Gene position: 2217103-2218272 (Clockwise)
Preceding gene: 160874968
Following gene: 160874971
Centisome position: 41.46
GC content: 47.69
Gene sequence:
>1170_bases TTGAGCCAGATAAAATCTCAAGTGTGTGGCTGGGTTGAACAGGGACATATCACGCAAGAGCAAGCGAATACGCTTTATCG GCAGGTCACAGTGTTGCCAGATGCGTCGAGCTGGCGTGGCTTAATCGCTAACCTATTACTCTGGTTTGGGGCCTTGAGCT TTGCCTCTGGGGTGATTTTTTTCTTTGCCTATAATTGGCAATCCCTCGGGCGTTTTGCCAAATTTGGCCTTATTGAAGTG GCGATAGTGCTCGCCATCGCCGCATTTGCTTGGCTCTATTATCGTGCTAATTCCCTTTCAGCGGCTTCCCATTCCCTTCG TCACAGTCACAGTCACAGTAACCAAAGCAACGACAGCAGATTTGGTGCGACGACAGCCAATGGTGTGTTATTGGCCGCGA GCGTATTGGTGGGCGGCTTATTAGCACTGGTTGGGCAAACCTATCAAACGGGCGCCGATCCTTGGCAGTTATTCGCCCTG TGGGCGTTAGTGATCTTGCCCTTCGCTTGGGTGGCGGGATTCGATGGTTTATGGCTGCTGCTGGTGGGACTTATTAACCT AAGTATAGGGATATTTCTGGATTCCTTTTCCCATTTATGGGGAGCCTTCTTGGATGAACAAGGCCAACTGCTGATCTTTA TCTGTTTGAATTTAGCTATCTATTACGCTTTTGTTTTTCTAGACCGCAACGTCGTGGGGCGCTGGCATGCGCCAATTCTC GAATATGCGTGTTCACTGTTTGCGATGGGCTGTTTTACTTGGTTAATCACCTGGCTGATTTTCGATGATTTCTTTAAAGG TGATGGCTTTAGTACTGGTGTCATCAGTGGTTATCTTGCCCATCTAGTGTTGGGATTCGTTATTTTTCGCTATCGCTTAC CGCGCATTTATCCCTTGGCCTTGGGCGGTTTTAGCTTGATTGCCGTGGGCGCTGCTTTACTGATTCGGCTTATGTTTGAG GACAATGATCCCATAGGTGGTTTTTTGTTTATTGGGCTTTACATCATTTTGGCGAGCACAGGTTTGAGTATTTGGTTAAA GGAACTCAGTCGCAAGCTTAAACCACTGTCAGAATCTATGTCAGAATTAGAGCCTGTCTCTGAATTAGAGCTTGAGCCCG CAGCGAGAGCGACCCAAGGGAAAGTGGGAGACATTCATGAGCAACAATAA
Upstream 100 bases:
>100_bases ACAAGTATACACAATTTAATTTACTCAACGCTGTCGATGTTGTGCGAATTTTGAATAGGTCATAGTAAGCTAGCGCAAAC AGGATGAGGGAGAACTCACA
Downstream 100 bases:
>100_bases TGGCTTACCGGATGGCGAAAGAGTGACCAGTGCTTTAACGGGTTCAGTAGTGACTCCTTTAAAGTCTCCTTCAAAAGAGG ATGCCGCTTCAATTGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSQIKSQVCGWVEQGHITQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEV AIVLAIAAFAWLYYRANSLSAASHSLRHSHSHSNQSNDSRFGATTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFAL WALVILPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVFLDRNVVGRWHAPIL EYACSLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFE DNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSESMSELEPVSELELEPAARATQGKVGDIHEQQ
Sequences:
>Translated_389_residues MSQIKSQVCGWVEQGHITQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEV AIVLAIAAFAWLYYRANSLSAASHSLRHSHSHSNQSNDSRFGATTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFAL WALVILPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVFLDRNVVGRWHAPIL EYACSLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFE DNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSESMSELEPVSELELEPAARATQGKVGDIHEQQ >Mature_388_residues SQIKSQVCGWVEQGHITQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIFFFAYNWQSLGRFAKFGLIEVA IVLAIAAFAWLYYRANSLSAASHSLRHSHSHSNQSNDSRFGATTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALW ALVILPFAWVAGFDGLWLLLVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVFLDRNVVGRWHAPILE YACSLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLALGGFSLIAVGAALLIRLMFED NDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSESMSELEPVSELELEPAARATQGKVGDIHEQQ
Specific function: Unknown
COG id: COG4984
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43052; Mature: 42920
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQIKSQVCGWVEQGHITQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIF CCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFAYNWQSLGRFAKFGLIEVAIVLAIAAFAWLYYRANSLSAASHSLRHSHSHSNQSNDSR HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC FGATTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALVILPFAWVAGFDGLWLL CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVFLDRNVVGRWHAPIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EYACSLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGGFSLIAVGAALLIRLMFEDNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSESM HCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SELEPVSELELEPAARATQGKVGDIHEQQ HHCCCHHHCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure SQIKSQVCGWVEQGHITQEQANTLYRQVTVLPDASSWRGLIANLLLWFGALSFASGVIF CHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH FFAYNWQSLGRFAKFGLIEVAIVLAIAAFAWLYYRANSLSAASHSLRHSHSHSNQSNDSR HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC FGATTANGVLLAASVLVGGLLALVGQTYQTGADPWQLFALWALVILPFAWVAGFDGLWLL CCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH LVGLINLSIGIFLDSFSHLWGAFLDEQGQLLIFICLNLAIYYAFVFLDRNVVGRWHAPIL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EYACSLFAMGCFTWLITWLIFDDFFKGDGFSTGVISGYLAHLVLGFVIFRYRLPRIYPLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGGFSLIAVGAALLIRLMFEDNDPIGGFLFIGLYIILASTGLSIWLKELSRKLKPLSESM HCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SELEPVSELELEPAARATQGKVGDIHEQQ HHCCCHHHCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA