| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874950
Identifier: 160874950
GI number: 160874950
Start: 2200186
End: 2200713
Strand: Direct
Name: 160874950
Synonym: Sbal195_1835
Alternate gene names: NA
Gene position: 2200186-2200713 (Clockwise)
Preceding gene: 160874949
Following gene: 160874951
Centisome position: 41.15
GC content: 48.48
Gene sequence:
>528_bases ATGAAGGTCAATTCGGATTTTTTCCCGCTGACCCAAATGGCGCAGCGGTTTGTGGATCAACTCGCCCAGTGTCGCCGTCT CGGTTTAACCGTATTGGAGGCGAGTGAGCACCATGTGTTGATTGAGTTGCCCTACAGCACTGAATTAATTGGTTATCCCG ATACGGGCGTTATCCATGGTGGAGTGATCACTACCTTAATGGATACTGCCTGTGGCAGTGCAGTGGTCAGTGCAATTTTC CATAAATTCAAATTGTTAGAAATCTCACCCACGCTCGATTTGCGGGTGGATTACATGAAGCCCGCTCAGCCCCATAAACC TGTGTTTGGATTTGCGGAATGCTACAAGTTGTCCTCCAATATTGCCTTTACCCGCGCGATTGCTTATCAAGACAGCATAG ATGATCCCATTGCCCATGCTGTTGGTTCCTTTATGCGGATCAGCCCGGAAATGGTCGGTGATGCCTTTAGACAAGCGTTG ATGGGTGAAGCTGTGCCTGAGATAGGAGATACTGATGAGCGCAAATAA
Upstream 100 bases:
>100_bases TGATAATGAACTGCAATCAACACGGTGGACAAGAAGTCTATCACATTCATTTCCACCTTGTGGGCGGGGAGCCTCTGGGG CCCATGTTGAGTCAAGGCCA
Downstream 100 bases:
>100_bases TTCGGAACTTGGCACAGCCAGTCCCACTCAACACGCCCAAGTAAAAGCACCTATCGATGTGCAAGGCATTGTTAAGCGCG CCACTGAGCTTAACGATTTT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKVNSDFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF HKFKLLEISPTLDLRVDYMKPAQPHKPVFGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL MGEAVPEIGDTDERK
Sequences:
>Translated_175_residues MKVNSDFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF HKFKLLEISPTLDLRVDYMKPAQPHKPVFGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL MGEAVPEIGDTDERK >Mature_175_residues MKVNSDFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHGGVITTLMDTACGSAVVSAIF HKFKLLEISPTLDLRVDYMKPAQPHKPVFGFAECYKLSSNIAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQAL MGEAVPEIGDTDERK
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19350; Mature: 19350
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVNSDFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEECCCCCCCCCC GVITTLMDTACGSAVVSAIFHKFKLLEISPTLDLRVDYMKPAQPHKPVFGFAECYKLSSN HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC IAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQALMGEAVPEIGDTDERK CHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKVNSDFFPLTQMAQRFVDQLAQCRRLGLTVLEASEHHVLIELPYSTELIGYPDTGVIHG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEECCCCCCCCCC GVITTLMDTACGSAVVSAIFHKFKLLEISPTLDLRVDYMKPAQPHKPVFGFAECYKLSSN HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC IAFTRAIAYQDSIDDPIAHAVGSFMRISPEMVGDAFRQALMGEAVPEIGDTDERK CHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA