| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874885
Identifier: 160874885
GI number: 160874885
Start: 2121960
End: 2123636
Strand: Reverse
Name: 160874885
Synonym: Sbal195_1770
Alternate gene names: NA
Gene position: 2123636-2121960 (Counterclockwise)
Preceding gene: 160874886
Following gene: 160874884
Centisome position: 39.71
GC content: 50.39
Gene sequence:
>1677_bases ATGCGACGTCTGTATCCACTCTGTGCGCTGGCTATGCTCAGTGCCTGTAGTCCGAATTCATCCCAATCCGATGGCAACAT TACTTTGGCTGAACTTAAAACAGTGCAGTTTAATGAAGCGCGCTTTAGAAATGATATTAAAGCCCTGTCATCCGATGAAT TTGAAGGTCGAGCACCGACCACTCACGGTGAAAAACTCACCTTGAACTATTTGACTAAAGCCTTTACAGAGATGGGGCTC AAGGGCGCGTATCAAGGCAGCTTTTTGCAACCTGTGCCTATGGTGAGCTATACCGCAGATGAAGCGCAGCAAGTTACGCT GGCAGGATTACCCTTTAAATACCGGAAAGATCTGGTGCTCAGCAGTCGTCACGATAACGGTGGCATTAACATTGAAAACG CGCCATTAGTCTTCGTTGGCTATGGGGTGAACGCACCCGAATATGGTTGGAATGATTACCAAGATCTCGACATGAAAGGC AAAATCGCGGTGATCTTAGTGAACGATCCCGGCTTTGCTCGCCCTGACTCGGGTAAATTCAACGGCAAAGCCATGACCTA TTACGGCCGCTGGAGCTATAAGTTTGAAGAAGCCAGCCGTCAAGGCGCCCTTGGCGCGCTGATCATCCATGATACTGAAC CCGCCTCTTATCCTTGGTCTGTGGTAGAAAATAGCTGGACTGGGCCACAGCAAGATCTGGTGCTGAGTAAAGCCGAACAA GATAGCCGCATCCAAGTCGAAGGCTGGCTTACATTGGACGCAGCAACCCAACTGTTTGATAAAGCGGGTTTATCACTGCC GAGCTTGATGGCGCGCGCCGCCGACAGCCCAATTAATGTCCCCCTTGAGCAAACTGGCAGTATCTCCTTTAAAAATAAAG CCGAATACGCAAATAGCTACAACGTGGTCGCCACGCTCCCCGGCAGCACACAAGCCGACGAGCAGATCCTCTACACCGCC CATTGGGATCACATAGGTAAAGACGAGACGAAAGCAGGCGATCAGATTTACAACGGCGCCATGGACAATGCCTCAGGCAC TGCCGGCATTCTCGAAATCGCCAGACAATTAGCCGATAATGCGAAACAAGGCCACGGTTTAGCGCGCTCGGTCACCTTTA TTGCCACCACAGGTGAAGAACAGGGCTTACTCGGTTCGCGCTATTACGCTGCCAATCCACTTTACCCTATCGACAAAACC GTGGCAGTGTTAAACCTCGACAGCACGAATATCTACGGTAAAACCAATGACTTTACCATCGTTGGCAAAGGTAAATCTGA GTTAGAAACCTACCTTATCGATGCGGCGAAACAACAAAACCGCATCGCCATGGGTGAGAAAAATCCCGCTTCGGGCGGTT TCTTCCGTTCAGATCATTTCAGCTTTGCCAAACTGGGCGTGCCAGCGGTATTTGCCGGCGGCGGTAGCGACCCCGTTGAT GAAGCCACGGCTGCTTATAAAACCCAGATGCAAGCGACAATGAAAGGCTGTTATCACAATGTCTGCGATGAATACCGTGA AGACTGGGATTTGAGCGGCGCGCTGCAAGATTTGCAAATCTACTACCAAGTCACGCGCACATTGGGCAACAGCAAAGATT GGCCGGGATACTATCAAGGCACAGAGTTCAATAGCCTGCGCCCAGCTAAAACGACGCTTGTGACAGATACAAAATAG
Upstream 100 bases:
>100_bases GCCTTGTGGCTCACAGCGGCTTGCTTCATGATAAGCCTCGCTTCTGATTGATTAACAGAAATCTAAAATTCCTTAATTAA AACAACAGTAGGATTAACCT
Downstream 100 bases:
>100_bases CAGCTTGTATCAGTGACAGCTTGTGAGAGGCGGCTTAGTTAGCCGTCTCTTATTCTTATTGACGCCCGCTAGTCGCACCT GCGAAATAAAGCACCAGCTG
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; M20/M25/M40 Family Peptidase; LB Protein; Protein Containing Aminopeptidase Domain; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRRLYPLCALAMLSACSPNSSQSDGNITLAELKTVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLNYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKAGLSLPSLMARAADSPINVPLEQTGSISFKNKAEYANSYNVVATLPGSTQADEQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTNDFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYREDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLVTDTK
Sequences:
>Translated_558_residues MRRLYPLCALAMLSACSPNSSQSDGNITLAELKTVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLNYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKAGLSLPSLMARAADSPINVPLEQTGSISFKNKAEYANSYNVVATLPGSTQADEQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTNDFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYREDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLVTDTK >Mature_558_residues MRRLYPLCALAMLSACSPNSSQSDGNITLAELKTVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLNYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKAGLSLPSLMARAADSPINVPLEQTGSISFKNKAEYANSYNVVATLPGSTQADEQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTNDFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYREDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLVTDTK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61079; Mature: 61079
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLYPLCALAMLSACSPNSSQSDGNITLAELKTVQFNEARFRNDIKALSSDEFEGRAPT CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCC THGEKLTLNYLTKAFTEMGLKGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVL CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHCCEEE SSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKGKIAVILVNDPGFARPDSGKF ECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ CCEEEEEEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHEECCCC DSRIQVEGWLTLDAATQLFDKAGLSLPSLMARAADSPINVPLEQTGSISFKNKAEYANSY CCEEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCCEEECCHHHHCCCC NVVATLPGSTQADEQILYTAHWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADN EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH AKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKTVAVLNLDSTNIYGKTNDFTI HHHCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEEECCCCCEEE VGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCHHHCCCCEEEECCCCCCHH EATAAYKTQMQATMKGCYHNVCDEYREDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TEFNSLRPAKTTLVTDTK CCCCCCCCCCEEEEECCC >Mature Secondary Structure MRRLYPLCALAMLSACSPNSSQSDGNITLAELKTVQFNEARFRNDIKALSSDEFEGRAPT CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECHHHHHHHHHHHCCCCCCCCCCC THGEKLTLNYLTKAFTEMGLKGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVL CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHCCEEE SSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKGKIAVILVNDPGFARPDSGKF ECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ CCEEEEEEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHEECCCC DSRIQVEGWLTLDAATQLFDKAGLSLPSLMARAADSPINVPLEQTGSISFKNKAEYANSY CCEEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHCCCCEEECCHHHHCCCC NVVATLPGSTQADEQILYTAHWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADN EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH AKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKTVAVLNLDSTNIYGKTNDFTI HHHCCCCEEEEEEEEECCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCEEECCCCCEEE VGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCHHHCCCCEEEECCCCCCHH EATAAYKTQMQATMKGCYHNVCDEYREDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TEFNSLRPAKTTLVTDTK CCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA