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The map label for this gene is yjjU [H]

Identifier: 160874883

GI number: 160874883

Start: 2118371

End: 2119489

Strand: Direct

Name: yjjU [H]

Synonym: Sbal195_1768

Alternate gene names: 160874883

Gene position: 2118371-2119489 (Clockwise)

Preceding gene: 160874882

Following gene: 160874889

Centisome position: 39.62

GC content: 47.63

Gene sequence:

>1119_bases
ATGCACGTCGTCAGCCACTTAGCCTCTAAAGACGCTCAATCTAACGCTAGCCCACAGGTGGCCCTGATTGCTGAAGGGGG
TGGCCAGCGTGGCATTTTCACCGCAGGGGTGCTTGATGCTTGGCTTGATGGCGGATTCGATCCCTTTGATTTATTTATTG
GTACATCTGCAGGTTCACAGAATCTCAGCAGTTTTTTAGCCCGTCAAAAGGGTTATGCCAAACGTTTGATTCGCGGTTTG
TCGCGCCATAAACGTTTCTATCGACTCGGTCGCGGGTTAGTCGGCGGCAATGTGGTCGATTTAGATTGGTATTTTGAGCA
GACTAGACAAGGGATGTTCAAATTAGATCTTAATGCGGCGACAGCCTCACTCGGTCATCGGCAGTTACTGATCACCACCA
CCAATGCCAGTAATCGCAAGGGATATTTTTTAAGTCCAAGCAGTAAAAGCCAATGGCGCGAATTGCTTAAAGCCTCCAGC
GCATTGCCATTTTTGTATAAACAAGGTGTGAAACTCACGCCTTGGCTAAATGATAATGCCTGTAATAGTGACAAGGCCTG
TAATAACGGCGAGGCTAATCATGGCGGGTCGCATCACAGCGCAGCATTGAGCGAAGCTATCGACAGTGATTTTTATCTCG
ACGGCGGCTTAGCCGCGCCTTTACCTGTGCGTGAGGCCTATCGTCGTGGTGCCCGTAAAATTGTGGTGATCCGCACTGTG
AGTGAGGATTTTCAGGCGCAATCGGCTTGGGTGCATAAACTTAAATCTTGGATTTGTGTTTCTGGTTTTTGCCCGAAAAC
CATAGATTATTTAGTGCAGCACGAACAAGCCTATCAGGATGAATTGGATTTTATGGCAAATCCGCCAGAGGATGTGGAGA
TAGTGCAAATTTTTGCCGCTGAAAATTTGCAGAGTAAGTTATTGGGTAGCACCGATGCCGATTTACGCCATGATTATCAT
GCGGGCATGAGTGCCGGAAAGCAGTTTTTAAGCTTAGATCCGATGGCGTTGACGCAGAGTAATGCTTATTTTCAAACTCA
AGTGCAAACCAACGCTCACACTCAAACCCAAATTCAAGCTCACTCTCAAATCAAGCCATACAGTGCGCTGTCGGCCTAG

Upstream 100 bases:

>100_bases
AATAGCATTTTCCAATTAAGATGATAGTTTCTATCCGTTATCTTTTCTCATTTAGCTTGTTTAGACTCGCCTTATATGAA
TTATTCGATAAGGTTTTCCT

Downstream 100 bases:

>100_bases
TTTAATTCTAGAGTTAAGACACAATTATGTGCACGAGTAAGCAATAAAAGTAAACAGCATCGAAATACAAAAGCCACCCT
AGGGTGGCTTTTGTGGTTGG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MHVVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASNRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGEANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFMANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMSAGKQFLSLDPMALTQSNAYFQTQVQTNAHTQTQIQAHSQIKPYSALSA

Sequences:

>Translated_372_residues
MHVVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASNRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGEANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFMANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMSAGKQFLSLDPMALTQSNAYFQTQVQTNAHTQTQIQAHSQIKPYSALSA
>Mature_372_residues
MHVVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQNLSSFLARQKGYAKRLIRGL
SRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAATASLGHRQLLITTTNASNRKGYFLSPSSKSQWRELLKASS
ALPFLYKQGVKLTPWLNDNACNSDKACNNGEANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFMANPPEDVEIVQIFAAENLQSKLLGSTDADLRHDYH
AGMSAGKQFLSLDPMALTQSNAYFQTQVQTNAHTQTQIQAHSQIKPYSALSA

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=314, Percent_Identity=35.6687898089172, Blast_Score=198, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 40898; Mature: 40898

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQ
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHEEEECCCCHH
NLSSFLARQKGYAKRLIRGLSRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEECCHH
TASLGHRQLLITTTNASNRKGYFLSPSSKSQWRELLKASSALPFLYKQGVKLTPWLNDNA
HHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCC
CNSDKACNNGEANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFMANPPEDVEIVQIFAA
CHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
ENLQSKLLGSTDADLRHDYHAGMSAGKQFLSLDPMALTQSNAYFQTQVQTNAHTQTQIQA
HCHHHHHCCCCCHHHHHHHHHHHHHCHHHHCCCCHHEECCCCEEEEEEECCCCCHHHHHH
HSQIKPYSALSA
HHCCCCHHHCCC
>Mature Secondary Structure
MHVVSHLASKDAQSNASPQVALIAEGGGQRGIFTAGVLDAWLDGGFDPFDLFIGTSAGSQ
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEHHHHHHHHHCCCCCHHHEEEECCCCHH
NLSSFLARQKGYAKRLIRGLSRHKRFYRLGRGLVGGNVVDLDWYFEQTRQGMFKLDLNAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHCCCEEEEECCHH
TASLGHRQLLITTTNASNRKGYFLSPSSKSQWRELLKASSALPFLYKQGVKLTPWLNDNA
HHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCHHHHCCCEECCCCCCCC
CNSDKACNNGEANHGGSHHSAALSEAIDSDFYLDGGLAAPLPVREAYRRGARKIVVIRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHCCCCEEEEEEEC
SEDFQAQSAWVHKLKSWICVSGFCPKTIDYLVQHEQAYQDELDFMANPPEDVEIVQIFAA
CHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
ENLQSKLLGSTDADLRHDYHAGMSAGKQFLSLDPMALTQSNAYFQTQVQTNAHTQTQIQA
HCHHHHHCCCCCHHHHHHHHHHHHHCHHHHCCCCHHEECCCCEEEEEEECCCCCHHHHHH
HSQIKPYSALSA
HHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]