| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is fct [H]
Identifier: 160874882
GI number: 160874882
Start: 2115889
End: 2118135
Strand: Direct
Name: fct [H]
Synonym: Sbal195_1767
Alternate gene names: 160874882
Gene position: 2115889-2118135 (Clockwise)
Preceding gene: 160874881
Following gene: 160874883
Centisome position: 39.57
GC content: 46.68
Gene sequence:
>2247_bases ATGCGCTCGCGCTGGGGACATTCTGTGAAGACTCGTTTCGCCTACTCATTAATTGCACTTGCACTCGCTCAACATCAGTC GACATTCGCCGCTGAAACCGTACTCGATAAAGAGGCTCCACAGCAGACCTTGTCTACGAGCTCACCCGTTGCAAGTCCTG CATCGACTGAGCCTGCAGCCTATGAGCAAGTTAAGCTGGCAGCACCTGAGCGAATTGCCGTTCATGGCCGCGCGATGCAA ATGTACGTCGATAAAGAAACGACTGTTGGCACTAAGACGGCGATTAATGTGATGGAATTGCCGCAGTCGGTGCAAGTGCT GACCGAGCAGTTAATTGTTGACCAAGCGGCGCGCAATATTACTGATTTATACCGCTCAATCGCTGGCGTGAGTGAGTTCA GTTATTCGGGCGTGACCTTTCGCGGTTTCCGTGACGATGCCAACGTCTTTTATGATGGGGTAAGGGGCGATCCCTATTCG GGATTTTCTGTGCCGCAACTGTTTAATGTGCAGCGGGTTGAAGTGTTAAAAGGCCCGGCATCGGCACTTTATGGAGGTGG TGAACCCGGCGGCATGATCAACTATGTCACTAAAAAACCAACTTTTGTCGAGAGTAAAGAGCTGACATTGAGCACCGGCA GCGAGGATATGATGGGTGGCTCGCTGGATTTGACCGGCGGCTTAACCCAAAATCTCGCCTATCGCTTTGGCGCCTATTAT CAGCAGGAAGATAGCTTTCGAAATAATGCCGATAGCCAAAATGCTGAAGTGGCGGGTGGGTTACTCTACGAAATCAGTGA TGATACTAAGCTCACCACGACCTTCGATATCATTAAGCAGGATTTAGGCGGCAATCGACTGCGCGGCGTGCCTGTCGATA ATGACGGTAATTTCCTTGTTGCGCCATCCTATAATGCCAATGAGAAGAGTGACTTCCAGAAGATGGATGCACTGGTGCTG CAATCGATTCTCGATCATCAATTCACCGATAACTTCTCTGTCAAGACTCAGATCCGTTATCTGAATAATGATTCCACGCA GCAATATCATGAATCGAGAGGTTGGGCGACCTTAGATGCCAATAAAAAGCCCATTATGGGTGATGGCACCATTAAGCGTG AATACCGAGTGCAAGCTCGTGCCAACGATGAAATCAGTTTAACCAATGATTTTGTTTATGCATTCGATGCCTTAGGTTTT GAACATGAGTTCCTGTTTGGTGGCGATTATCACTATGTTGAAACCGAATATAGCTACAAGTTGGCGACGGATAAAACAGG TGTTGGCAACCTGAATATTTTTGACCTTAATTATGGTGAAACTGACCCAAGTACTTACACGCTGCAAGACAAAAATACCG ATGGCACTCGCGCTAACCGCTATGGCGTGTATGTGCAGGAACATCTGCACTTTAATGAACAGTGGTCATTGATTGCTGGT CTGCGTTTCAGCCAGTTTGATGACTATGATAAAAAGACTGGTTTCTCCTTCAGCGATAACGCGATAACGCCAAGAGCTGG GCTTAATTATCGTCCAATCGATTCAATGTCCTTTTATTTGAATTACTCAGAGAGCTTCAATCCAGCATCTTTAACCGATC AAGCACAAGATATTGCTGACGGTTTCCTCGATCCAGAAACGGGCAATCAAATTGAGCTTGGGATGAAAAATGAATGGCTT GATGGCCAGTTCATGACCACGCTCGCGGTATATCGCATTGAAAAACAAAATGTTGCTCAAGCTAACCCTTTAAATACTGG CGATGACGATGGCATTCCCGCTTTACTTAATTTGGGTGAAGTACACAGTCAAGGGGTTGAATGGACGCTGGTGGGGGATT TAACCGATAACCTGACTGTTACGGCAAACTATGCCTATAACGAGACTGAAGTGGTTAAAGGAGTCACTAACGACAGTTTA ACCAATACCTTCGATAGTAAGCACTTTGCCAATGCGCCGCGTCATCAAGCGGGGATATGGACCCGTTACGATATCAATGC ACTCGATTCGGCGATTGCCTTTGGTATGGACTATGTGGGCGAGCAGTTCAGCCTCGATGGTCAAATAGTGAAGCCCCATA CGATTTTTGACATGAGCTGGACGACTCAGTGGGATCAAACTCAAGTTCGTTTAAATCTTAAAAATATCTTCGACAAAGAA TATGCCGTCAGTGGGTTTAGCGAACGTAATGGCCATTTCCCCGGTGAGCCGCGTAATATCACGTTAGAACTGAGTCATAA GTTTTAA
Upstream 100 bases:
>100_bases TAAATTCAAATGATAATCGTTGTTATTCGTAAATCATTCTTTATAATGACGGCCAATTCGTTTGAATACATTTGTAAACC CTTTGGTTTATGCCATTTTT
Downstream 100 bases:
>100_bases TGCATTGATGTGAAAATAGCTTGTTCGTTAAGGATGACGAACAAGCTAACCTGCCTAACCTTGCTTATCACTGCCATTAT TTCTGCCAGTATTTGCTGTC
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MRSRWGHSVKTRFAYSLIALALAQHQSTFAAETVLDKEAPQQTLSTSSPVASPASTEPAAYEQVKLAAPERIAVHGRAMQ MYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYS GFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDLTGGLTQNLAYRFGAYY QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDALVL QSILDHQFTDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGF EHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKNTDGTRANRYGVYVQEHLHFNEQWSLIAG LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTDQAQDIADGFLDPETGNQIELGMKNEWL DGQFMTTLAVYRIEKQNVAQANPLNTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNETEVVKGVTNDSL TNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWDQTQVRLNLKNIFDKE YAVSGFSERNGHFPGEPRNITLELSHKF
Sequences:
>Translated_748_residues MRSRWGHSVKTRFAYSLIALALAQHQSTFAAETVLDKEAPQQTLSTSSPVASPASTEPAAYEQVKLAAPERIAVHGRAMQ MYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYS GFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDLTGGLTQNLAYRFGAYY QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDALVL QSILDHQFTDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGF EHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKNTDGTRANRYGVYVQEHLHFNEQWSLIAG LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTDQAQDIADGFLDPETGNQIELGMKNEWL DGQFMTTLAVYRIEKQNVAQANPLNTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNETEVVKGVTNDSL TNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWDQTQVRLNLKNIFDKE YAVSGFSERNGHFPGEPRNITLELSHKF >Mature_748_residues MRSRWGHSVKTRFAYSLIALALAQHQSTFAAETVLDKEAPQQTLSTSSPVASPASTEPAAYEQVKLAAPERIAVHGRAMQ MYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNITDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYS GFSVPQLFNVQRVEVLKGPASALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDLTGGLTQNLAYRFGAYY QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLVAPSYNANEKSDFQKMDALVL QSILDHQFTDNFSVKTQIRYLNNDSTQQYHESRGWATLDANKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGF EHEFLFGGDYHYVETEYSYKLATDKTGVGNLNIFDLNYGETDPSTYTLQDKNTDGTRANRYGVYVQEHLHFNEQWSLIAG LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTDQAQDIADGFLDPETGNQIELGMKNEWL DGQFMTTLAVYRIEKQNVAQANPLNTGDDDGIPALLNLGEVHSQGVEWTLVGDLTDNLTVTANYAYNETEVVKGVTNDSL TNTFDSKHFANAPRHQAGIWTRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWDQTQVRLNLKNIFDKE YAVSGFSERNGHFPGEPRNITLELSHKF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=749, Percent_Identity=23.0974632843792, Blast_Score=145, Evalue=7e-36, Organism=Escherichia coli, GI1787344, Length=741, Percent_Identity=24.6963562753036, Blast_Score=138, Evalue=1e-33, Organism=Escherichia coli, GI1787024, Length=722, Percent_Identity=21.3296398891967, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1790743, Length=335, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83516; Mature: 83516
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRWGHSVKTRFAYSLIALALAQHQSTFAAETVLDKEAPQQTLSTSSPVASPASTEPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCH YEQVKLAAPERIAVHGRAMQMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNI HHEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYSGFSVPQLFNVQRVEVLKGPA HHHHHHHHCCHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEECCCH SALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDLTGGLTQNLAYRFGAYY HHHCCCCCCCCEEEEEECCCCEECCCEEEEECCCHHHCCCCEEECCCHHHHHHHHHCCHH QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLV CCCHHHCCCCCCCCCEECCEEEEEECCCCEEEHHHHHHHHHCCCCEEECEEECCCCCEEE APSYNANEKSDFQKMDALVLQSILDHQFTDNFSVKTQIRYLNNDSTQQYHESRGWATLDA ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCEEEECC NKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGFEHEFLFGGDYHYVETEYSYK CCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEHHCCCCEEEEECCCEEEEEEEEEEE LATDKTGVGNLNIFDLNYGETDPSTYTLQDKNTDGTRANRYGVYVQEHLHFNEQWSLIAG EECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEC LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTDQAQDIAD CCHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH GFLDPETGNQIELGMKNEWLDGQFMTTLAVYRIEKQNVAQANPLNTGDDDGIPALLNLGE CCCCCCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCHH VHSQGVEWTLVGDLTDNLTVTANYAYNETEVVKGVTNDSLTNTFDSKHFANAPRHQAGIW HHCCCCEEEEEECCCCCEEEEEEECCCCHHHEECCCCCCHHCCCCCCHHCCCCCCCCCCE TRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWDQTQVRLNLKNIFDKE EEEEHHHHHHHHHHHHHHCCCEECCCCEEECCEEEEEECCCCCCCCEEEEEEHHHHCCHH YAVSGFSERNGHFPGEPRNITLELSHKF HHHCCCCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MRSRWGHSVKTRFAYSLIALALAQHQSTFAAETVLDKEAPQQTLSTSSPVASPASTEPAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCH YEQVKLAAPERIAVHGRAMQMYVDKETTVGTKTAINVMELPQSVQVLTEQLIVDQAARNI HHEEEECCCCEEEECCEEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH TDLYRSIAGVSEFSYSGVTFRGFRDDANVFYDGVRGDPYSGFSVPQLFNVQRVEVLKGPA HHHHHHHHCCHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCHHCCCCCEEEECCCH SALYGGGEPGGMINYVTKKPTFVESKELTLSTGSEDMMGGSLDLTGGLTQNLAYRFGAYY HHHCCCCCCCCEEEEEECCCCEECCCEEEEECCCHHHCCCCEEECCCHHHHHHHHHCCHH QQEDSFRNNADSQNAEVAGGLLYEISDDTKLTTTFDIIKQDLGGNRLRGVPVDNDGNFLV CCCHHHCCCCCCCCCEECCEEEEEECCCCEEEHHHHHHHHHCCCCEEECEEECCCCCEEE APSYNANEKSDFQKMDALVLQSILDHQFTDNFSVKTQIRYLNNDSTQQYHESRGWATLDA ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHHHHCCEEEECC NKKPIMGDGTIKREYRVQARANDEISLTNDFVYAFDALGFEHEFLFGGDYHYVETEYSYK CCCCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEHHCCCCEEEEECCCEEEEEEEEEEE LATDKTGVGNLNIFDLNYGETDPSTYTLQDKNTDGTRANRYGVYVQEHLHFNEQWSLIAG EECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECCCCCCEEEEEC LRFSQFDDYDKKTGFSFSDNAITPRAGLNYRPIDSMSFYLNYSESFNPASLTDQAQDIAD CCHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH GFLDPETGNQIELGMKNEWLDGQFMTTLAVYRIEKQNVAQANPLNTGDDDGIPALLNLGE CCCCCCCCCEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCCHH VHSQGVEWTLVGDLTDNLTVTANYAYNETEVVKGVTNDSLTNTFDSKHFANAPRHQAGIW HHCCCCEEEEEECCCCCEEEEEEECCCCHHHEECCCCCCHHCCCCCCHHCCCCCCCCCCE TRYDINALDSAIAFGMDYVGEQFSLDGQIVKPHTIFDMSWTTQWDQTQVRLNLKNIFDKE EEEEHHHHHHHHHHHHHHCCCEECCCCEEECCEEEEEECCCCCCCCEEEEEEHHHHCCHH YAVSGFSERNGHFPGEPRNITLELSHKF HHHCCCCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]