| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yceF [C]
Identifier: 160874868
GI number: 160874868
Start: 2102888
End: 2103472
Strand: Reverse
Name: yceF [C]
Synonym: Sbal195_1753
Alternate gene names: 160874868
Gene position: 2103472-2102888 (Counterclockwise)
Preceding gene: 160874880
Following gene: 160874865
Centisome position: 39.34
GC content: 48.72
Gene sequence:
>585_bases ATGCCAACCTCATTAATCTTAGCTTCGACCTCTGTATACCGACAATCTTTACTGCAAAAACTCGGTCTTCCCTTCGAATG CTGCAATCCTGATATTGACGAAACGGCGCATATCGATGAATCGGCCCATGCCTTAGTGCTGCGATTAGCCAAAGCAAAAG CCGTCGCAGGTGCAGAACAATTCCCCGATGGGCTGATTATTGGCTCCGATCAAGTTGCCGTCATTGATGGCAAGATTATC GGTAAGCCCCATCATTTTGATAATGCCGTCGCGCAGCTCACCCAAGCCTCTGGCAAGGCCATCACCTTTTATACTGGTCT TGCACTCTATAATGCCGAAACGGGCGCCATGGCCGCCGAGGTTGAACCCTTTACGGTTCATTTCAGGCATCTTAGCCATG CACAGATTGTCGCCTACATAGAAAAAGAAGAGCCCTACTACTGCGCGGGCAGTTTTAAGAGTGAAGGCTTAGGCATAGCG TTATTTACCGAGCTTGAAGGTCGCGATCCGAATACCTTAGTTGGCTTACCACTGATATTACTGACAGAAATGCTGTTGGC CCAAGGTGTAGACGTTCTCGCTTAA
Upstream 100 bases:
>100_bases TAGTCGCATTCACTGAAAAGAAACCGTAAAAGACGAAACTCTTGCACTCTCTAGCGCAGATTGGTCACAATATGAGTCAC TCTTTTGCGGATATCCTATT
Downstream 100 bases:
>100_bases CCGGCTTACACGTTAGCTTATTCGTTTACTGAGGTTTTGCTCAGCGTGCTCTGTCTATTAAATCGATTAAGCGCACCCCA AAATGCCGAGCAGCAGATTC
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MPTSLILASTSVYRQSLLQKLGLPFECCNPDIDETAHIDESAHALVLRLAKAKAVAGAEQFPDGLIIGSDQVAVIDGKII GKPHHFDNAVAQLTQASGKAITFYTGLALYNAETGAMAAEVEPFTVHFRHLSHAQIVAYIEKEEPYYCAGSFKSEGLGIA LFTELEGRDPNTLVGLPLILLTEMLLAQGVDVLA
Sequences:
>Translated_194_residues MPTSLILASTSVYRQSLLQKLGLPFECCNPDIDETAHIDESAHALVLRLAKAKAVAGAEQFPDGLIIGSDQVAVIDGKII GKPHHFDNAVAQLTQASGKAITFYTGLALYNAETGAMAAEVEPFTVHFRHLSHAQIVAYIEKEEPYYCAGSFKSEGLGIA LFTELEGRDPNTLVGLPLILLTEMLLAQGVDVLA >Mature_193_residues PTSLILASTSVYRQSLLQKLGLPFECCNPDIDETAHIDESAHALVLRLAKAKAVAGAEQFPDGLIIGSDQVAVIDGKIIG KPHHFDNAVAQLTQASGKAITFYTGLALYNAETGAMAAEVEPFTVHFRHLSHAQIVAYIEKEEPYYCAGSFKSEGLGIAL FTELEGRDPNTLVGLPLILLTEMLLAQGVDVLA
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Escherichia coli, GI87081830, Length=193, Percent_Identity=61.139896373057, Blast_Score=237, Evalue=3e-64, Organism=Escherichia coli, GI1789646, Length=184, Percent_Identity=34.7826086956522, Blast_Score=94, Evalue=6e-21, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=31.25, Blast_Score=77, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 20792; Mature: 20661
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSLILASTSVYRQSLLQKLGLPFECCNPDIDETAHIDESAHALVLRLAKAKAVAGAEQ CCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH FPDGLIIGSDQVAVIDGKIIGKPHHFDNAVAQLTQASGKAITFYTGLALYNAETGAMAAE CCCCEEECCCCEEEEECEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEE VEPFTVHFRHLSHAQIVAYIEKEEPYYCAGSFKSEGLGIALFTELEGRDPNTLVGLPLIL CCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEHHHHHH LTEMLLAQGVDVLA HHHHHHHCCCHHCC >Mature Secondary Structure PTSLILASTSVYRQSLLQKLGLPFECCNPDIDETAHIDESAHALVLRLAKAKAVAGAEQ CCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH FPDGLIIGSDQVAVIDGKIIGKPHHFDNAVAQLTQASGKAITFYTGLALYNAETGAMAAE CCCCEEECCCCEEEEECEEECCCCCHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEE VEPFTVHFRHLSHAQIVAYIEKEEPYYCAGSFKSEGLGIALFTELEGRDPNTLVGLPLIL CCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEEEECCCCCCEEEHHHHHH LTEMLLAQGVDVLA HHHHHHHCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]