| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874860
Identifier: 160874860
GI number: 160874860
Start: 2090480
End: 2091355
Strand: Reverse
Name: 160874860
Synonym: Sbal195_1745
Alternate gene names: NA
Gene position: 2091355-2090480 (Counterclockwise)
Preceding gene: 160874864
Following gene: 160874857
Centisome position: 39.11
GC content: 36.19
Gene sequence:
>876_bases ATGGGCTTAACAAGCGCCCCTATCACTTATGCTAACGATCAATTCATTATCAATCACTCAGAATCGAATCTTGACCATAG ATACCAATATACATATGACCTTTTGCAGCTAGTGATTGATGCAACCAATGCCGATTTCGGCCAAGCCTCACTGGAGGTTT CCGATGTCATTATGAGCAGAAATCGCATATTGAGAGAATTACAAGATGGTCAAACTATTAATGTTATAGCTGAAGCCTCA AGTTTAGAGTGGAACACTAAGCTTATACCAATAAAAATCCCCATACGAAAGGGAATTCAAGGGTTTAGAGTTTTCATTAT TCAGAAGGAAAATGCGGAATCGTTAGCTCAAATAACCTCTATTATGCAGTTAACTTCTCTTAAAACAGGGTCAGGTAGTC AATGGTCAACTAAAGTTGCCATGCAGCAGGCTGGATTTGATGTCGTAGAGAGCATTCAATATGATAGTTTATTTAACATG CTATCAAAAGGAAGGTTTGTTACATTTGGCCGTGGAGTGAACGAAGCTTATCAAGAACTTGAGCAGTTCAATCTACAGTA TCCAAATCTAGTTATTGATGAAAAAATTTTGCTGCATATCCCTCTTGCGACGTATTTTTATGTTTCACCTAACAAGCCTC ACTTAGCCCAAAGAATAGAAGTCGGTCTTCGAAGAATAATCAACAATGGTGAGTTTGAAAGATTATTTTACAAACGTCAT TGTGATTTTTTGATAAAAAGCAAAATGAATCAAAGGTTAATTTTTAAAATTGACAATCCTCTTATCTCCGAAGCTGAGAT GACTTCAATTGTAGGTAAAGATTTTCTACTCAATCCTAAGGATGACTTTTCCATTTTGTGTAAACAAAATCACTGA
Upstream 100 bases:
>100_bases GTATAAATGAATATATATTGAATCAATTTCTAAACATCGTCATGAGTTTCTTATGGATAATTTACAACGATTTAGAGTTT TTTTGCGCTTTCTTCTCTTG
Downstream 100 bases:
>100_bases TAGTGACGTCTGAAATTTTGAATAGCACTGTAAACGCCTACCAATTAGGTGTCGATTTAGACCGTTTTAACCATTGTCAA AAAACAAATGTGCTGCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGLTSAPITYANDQFIINHSESNLDHRYQYTYDLLQLVIDATNADFGQASLEVSDVIMSRNRILRELQDGQTINVIAEAS SLEWNTKLIPIKIPIRKGIQGFRVFIIQKENAESLAQITSIMQLTSLKTGSGSQWSTKVAMQQAGFDVVESIQYDSLFNM LSKGRFVTFGRGVNEAYQELEQFNLQYPNLVIDEKILLHIPLATYFYVSPNKPHLAQRIEVGLRRIINNGEFERLFYKRH CDFLIKSKMNQRLIFKIDNPLISEAEMTSIVGKDFLLNPKDDFSILCKQNH
Sequences:
>Translated_291_residues MGLTSAPITYANDQFIINHSESNLDHRYQYTYDLLQLVIDATNADFGQASLEVSDVIMSRNRILRELQDGQTINVIAEAS SLEWNTKLIPIKIPIRKGIQGFRVFIIQKENAESLAQITSIMQLTSLKTGSGSQWSTKVAMQQAGFDVVESIQYDSLFNM LSKGRFVTFGRGVNEAYQELEQFNLQYPNLVIDEKILLHIPLATYFYVSPNKPHLAQRIEVGLRRIINNGEFERLFYKRH CDFLIKSKMNQRLIFKIDNPLISEAEMTSIVGKDFLLNPKDDFSILCKQNH >Mature_290_residues GLTSAPITYANDQFIINHSESNLDHRYQYTYDLLQLVIDATNADFGQASLEVSDVIMSRNRILRELQDGQTINVIAEASS LEWNTKLIPIKIPIRKGIQGFRVFIIQKENAESLAQITSIMQLTSLKTGSGSQWSTKVAMQQAGFDVVESIQYDSLFNML SKGRFVTFGRGVNEAYQELEQFNLQYPNLVIDEKILLHIPLATYFYVSPNKPHLAQRIEVGLRRIINNGEFERLFYKRHC DFLIKSKMNQRLIFKIDNPLISEAEMTSIVGKDFLLNPKDDFSILCKQNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33361; Mature: 33230
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTSAPITYANDQFIINHSESNLDHRYQYTYDLLQLVIDATNADFGQASLEVSDVIMSR CCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH NRILRELQDGQTINVIAEASSLEWNTKLIPIKIPIRKGIQGFRVFIIQKENAESLAQITS HHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECHHHCCCEEEEEEEEECCHHHHHHHHH IMQLTSLKTGSGSQWSTKVAMQQAGFDVVESIQYDSLFNMLSKGRFVTFGRGVNEAYQEL HHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH EQFNLQYPNLVIDEKILLHIPLATYFYVSPNKPHLAQRIEVGLRRIINNGEFERLFYKRH HHCCCCCCCEEECCEEEEEECHHHEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH CDFLIKSKMNQRLIFKIDNPLISEAEMTSIVGKDFLLNPKDDFSILCKQNH HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure GLTSAPITYANDQFIINHSESNLDHRYQYTYDLLQLVIDATNADFGQASLEVSDVIMSR CCCCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH NRILRELQDGQTINVIAEASSLEWNTKLIPIKIPIRKGIQGFRVFIIQKENAESLAQITS HHHHHHHHCCCEEEEEEECCCCCCCCEEEEEEECHHHCCCEEEEEEEEECCHHHHHHHHH IMQLTSLKTGSGSQWSTKVAMQQAGFDVVESIQYDSLFNMLSKGRFVTFGRGVNEAYQEL HHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHH EQFNLQYPNLVIDEKILLHIPLATYFYVSPNKPHLAQRIEVGLRRIINNGEFERLFYKRH HHCCCCCCCEEECCEEEEEECHHHEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH CDFLIKSKMNQRLIFKIDNPLISEAEMTSIVGKDFLLNPKDDFSILCKQNH HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA