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The map label for this gene is nahR [H]

Identifier: 160874851

GI number: 160874851

Start: 2082529

End: 2083422

Strand: Reverse

Name: nahR [H]

Synonym: Sbal195_1735

Alternate gene names: 160874851

Gene position: 2083422-2082529 (Counterclockwise)

Preceding gene: 160874856

Following gene: 160874836

Centisome position: 38.96

GC content: 38.7

Gene sequence:

>894_bases
ATGAACAAGCTTGATAGGTTGGATATTAAACAGCTCAGAGTTTTTCAGGCGTTAATTCGTGAGCAAAGCGCATCGAAGGC
AGCTAGTCAGCTAGGGCTTACCCAACAAGCCGTTAGTGAGCAACTTAAGAAATTAAGGGACGTATTTGAAGATCGATTGT
TTCTTCGAAAAACTAATGGTTTTGTACCAACGCCTTTAGCAGAAGAATTATCGCGAGAAATCGACAAACTGCTTAGAGGA
TTTCAGGAGCTTCTGTCTCCCAAAGTATTTGATCCAACAACGGTTCTAGGAACCTATGTCATAACAGCAACAGACTATGC
ACAACAAATCGTTCTACCACAGTTAATTGCGACATTGAGACTTAAATCGCCGAACTTAAAAATCATTGTTAGAGATTTTG
AATTAGATAGGTTAAATGACTTAATGGAAAGCGGGAAAGTGAACCTAGCGATAGCATTTCCTGACTATATACCTAAACCT
TACCCAGTAATTAAGTTGTTTGAAGAACACCATATATGCATAACATCAAATCATTCAACGATTTCTAAAGTAAATCCCTC
ATTAAAAGAGATAGCAAGCTATCCGACGATTATTGCTTCACCATCCAGACCTAATTTTAAAGGATCAATAGATGATTGGT
TCAAGCAGTTTGGTTTAGAGCGTAATGTCGTTGTATCTGCACCTTGTTTTTCCGTAGTTCCACTTTACCTTGAAACAACG
GATTCTATTGCTTTCTTGCCTTCTAGAGCGGTAGAAGGATTAAACGTGACACAAATAGTAATGAGCGAGTCACCTGAGCC
ATTTGATGTTATCGCTGCATGGCATCCCAGGTATAGCAATGATCCGCTACAGAAATGGATTGTTTCTCTGTTAAAGGAAA
AATATCTCACATAG

Upstream 100 bases:

>100_bases
GGCTATGTTAGTGCGAGATAAAAACAATTAGAAACAACGTTTCTTTGTAAGTGATACAATAAAAATTGGTAATGAGTTGT
TCAGCAAGAAGGGGACTCGA

Downstream 100 bases:

>100_bases
GTTGCACTATCTTCTAAGGATGGACAACTAACACGCTTATGTCCCGAACTGTTGTGTAGATTGAGCGCTTAGAGCTCACA
CTAGACAGCTCAAAATCTCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNKLDRLDIKQLRVFQALIREQSASKAASQLGLTQQAVSEQLKKLRDVFEDRLFLRKTNGFVPTPLAEELSREIDKLLRG
FQELLSPKVFDPTTVLGTYVITATDYAQQIVLPQLIATLRLKSPNLKIIVRDFELDRLNDLMESGKVNLAIAFPDYIPKP
YPVIKLFEEHHICITSNHSTISKVNPSLKEIASYPTIIASPSRPNFKGSIDDWFKQFGLERNVVVSAPCFSVVPLYLETT
DSIAFLPSRAVEGLNVTQIVMSESPEPFDVIAAWHPRYSNDPLQKWIVSLLKEKYLT

Sequences:

>Translated_297_residues
MNKLDRLDIKQLRVFQALIREQSASKAASQLGLTQQAVSEQLKKLRDVFEDRLFLRKTNGFVPTPLAEELSREIDKLLRG
FQELLSPKVFDPTTVLGTYVITATDYAQQIVLPQLIATLRLKSPNLKIIVRDFELDRLNDLMESGKVNLAIAFPDYIPKP
YPVIKLFEEHHICITSNHSTISKVNPSLKEIASYPTIIASPSRPNFKGSIDDWFKQFGLERNVVVSAPCFSVVPLYLETT
DSIAFLPSRAVEGLNVTQIVMSESPEPFDVIAAWHPRYSNDPLQKWIVSLLKEKYLT
>Mature_297_residues
MNKLDRLDIKQLRVFQALIREQSASKAASQLGLTQQAVSEQLKKLRDVFEDRLFLRKTNGFVPTPLAEELSREIDKLLRG
FQELLSPKVFDPTTVLGTYVITATDYAQQIVLPQLIATLRLKSPNLKIIVRDFELDRLNDLMESGKVNLAIAFPDYIPKP
YPVIKLFEEHHICITSNHSTISKVNPSLKEIASYPTIIASPSRPNFKGSIDDWFKQFGLERNVVVSAPCFSVVPLYLETT
DSIAFLPSRAVEGLNVTQIVMSESPEPFDVIAAWHPRYSNDPLQKWIVSLLKEKYLT

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=290, Percent_Identity=21.7241379310345, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790147, Length=298, Percent_Identity=23.1543624161074, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33699; Mature: 33699

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLDRLDIKQLRVFQALIREQSASKAASQLGLTQQAVSEQLKKLRDVFEDRLFLRKTNG
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
FVPTPLAEELSREIDKLLRGFQELLSPKVFDPTTVLGTYVITATDYAQQIVLPQLIATLR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHH
LKSPNLKIIVRDFELDRLNDLMESGKVNLAIAFPDYIPKPYPVIKLFEEHHICITSNHST
CCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEECCCCH
ISKVNPSLKEIASYPTIIASPSRPNFKGSIDDWFKQFGLERNVVVSAPCFSVVPLYLETT
HHHCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHEEECC
DSIAFLPSRAVEGLNVTQIVMSESPEPFDVIAAWHPRYSNDPLQKWIVSLLKEKYLT
CCCEECHHHHCCCCCCEEHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKLDRLDIKQLRVFQALIREQSASKAASQLGLTQQAVSEQLKKLRDVFEDRLFLRKTNG
CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
FVPTPLAEELSREIDKLLRGFQELLSPKVFDPTTVLGTYVITATDYAQQIVLPQLIATLR
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEHHHHHHHHHHHHHHHHH
LKSPNLKIIVRDFELDRLNDLMESGKVNLAIAFPDYIPKPYPVIKLFEEHHICITSNHST
CCCCCCEEEEECCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCCCCEEEECCCCH
ISKVNPSLKEIASYPTIIASPSRPNFKGSIDDWFKQFGLERNVVVSAPCFSVVPLYLETT
HHHCCHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHEEECC
DSIAFLPSRAVEGLNVTQIVMSESPEPFDVIAAWHPRYSNDPLQKWIVSLLKEKYLT
CCCEECHHHHCCCCCCEEHEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]