| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjbA [C]
Identifier: 160874818
GI number: 160874818
Start: 2047621
End: 2048025
Strand: Reverse
Name: yjbA [C]
Synonym: Sbal195_1701
Alternate gene names: 160874818
Gene position: 2048025-2047621 (Counterclockwise)
Preceding gene: 160874819
Following gene: 160874817
Centisome position: 38.3
GC content: 41.73
Gene sequence:
>405_bases ATGCCATTTTATCACCAATATGGTTCTAAGAGCCTTAAAGCCGTAGAACACTTAGTCCTGTTTGTTATCGCTATTGCCAC TATCGTCGCGATAGGCCAAGAAATTGTGCATATTGTTTCTGTCCGTATGGTCGCACTAGCCGATTTACTCCTGTTATTCA TTTTCTTAGAAGTCTTAGCCATGGTGGCGAACTACTACGAATCCGGTAAGTTACCCGTGCGTATGCCGCTTTATATCGCG ATTGTGGCATTAGCTCGTTATCTCATTTTAGATATGAAGAGTATGGAAGATTGGCGTATTGCCGCGATATCACTGTCGAC GTTAATTTTAGCAGCAACTGTGATCGTCATTCGTTGGGGTCAGTTAAAAATGCCCTATCCTAAAAACCAAGAATACGACA ATTAA
Upstream 100 bases:
>100_bases AAACATATCTGTGAATTAAGTCACACAGCGGCGGCTAGCTTTTCCCTATAAGCTGATTTTTACTGTTACTATTTATAAAA ACATCAAGTAGGGAATGCCC
Downstream 100 bases:
>100_bases TCAAGCACCTGAGTTGGTGCTATTGAAGGCTTATTCAATGGCGCCTGCTGTCCTCGTTTTAAAACTATTATCAAAGACCT AGCTTTCACATTGGTATTCT
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: Protein PsiE
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPFYHQYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIA IVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Sequences:
>Translated_134_residues MPFYHQYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIA IVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN >Mature_133_residues PFYHQYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLAMVANYYESGKLPVRMPLYIAI VALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15183; Mature: 15051
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYHQYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLA CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYYESGKLPVRMPLYIAIVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC >Mature Secondary Structure PFYHQYGSKSLKAVEHLVLFVIAIATIVAIGQEIVHIVSVRMVALADLLLLFIFLEVLA CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYYESGKLPVRMPLYIAIVALARYLILDMKSMEDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA