| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is ygjP [H]
Identifier: 160874797
GI number: 160874797
Start: 2028244
End: 2028768
Strand: Reverse
Name: ygjP [H]
Synonym: Sbal195_1680
Alternate gene names: 160874797
Gene position: 2028768-2028244 (Counterclockwise)
Preceding gene: 160874798
Following gene: 160874796
Centisome position: 37.94
GC content: 40.57
Gene sequence:
>525_bases ATGAATCCATTAAAATACTTAAGCGGTTACAGCCCAGATATCCAACAGCAGGTACAGCAACATCTTGATGCTGGCACATT ACCCAAGCTACTGTTGAAACGTCATCCTGTCATACATAGCGTTCGCAGTGATAAAGCGCTGTACGACTACACCCAAGCGA TTAAAAACCAATTTTTACGCCAGTCGTCACCACTCTCAAAAGTGATCTTTGATGACAAAATTAACATTAGTCATCATGCA CTTGGCTTACATTCCTATGTCGCGCGAGTTCAAGGCAATAAAATCAAAGCTAAGAACGAAATTCGCATATCTTCACGTTT AAAGCGCGTACCAGAGCCTTTATTACGTATGGTTGTCGTACACGAATTAGCCCATTTAAAAGAAAAAGATCACAACAAGG CTTTCTATAATTTGTGTACTCATATGGAGCCGGATTATCACCAGTTTGAATTTGATTTACGCTTATTATTGACCTGTATC GACGCCAACATATCCCCTTATTCCGCAGATAAAGCCGACACCTGA
Upstream 100 bases:
>100_bases CTTTCGAAGCCGCTTACGCCCAGCAAAATCGCCGTATTTTCGGCAAAGTTTAAGTAATGCGATGACTCAGGCTCCGAAGT CATTCGGAGCCAAATTCCCT
Downstream 100 bases:
>100_bases CCTTAGTATATTTTTCGCTCACAACTTGACTGATAATAGTTTTCATTTAGAATATTGAAGTATCTCACGCTGCAGAATTC AGTAACGACAATGACGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNPLKYLSGYSPDIQQQVQQHLDAGTLPKLLLKRHPVIHSVRSDKALYDYTQAIKNQFLRQSSPLSKVIFDDKINISHHA LGLHSYVARVQGNKIKAKNEIRISSRLKRVPEPLLRMVVVHELAHLKEKDHNKAFYNLCTHMEPDYHQFEFDLRLLLTCI DANISPYSADKADT
Sequences:
>Translated_174_residues MNPLKYLSGYSPDIQQQVQQHLDAGTLPKLLLKRHPVIHSVRSDKALYDYTQAIKNQFLRQSSPLSKVIFDDKINISHHA LGLHSYVARVQGNKIKAKNEIRISSRLKRVPEPLLRMVVVHELAHLKEKDHNKAFYNLCTHMEPDYHQFEFDLRLLLTCI DANISPYSADKADT >Mature_174_residues MNPLKYLSGYSPDIQQQVQQHLDAGTLPKLLLKRHPVIHSVRSDKALYDYTQAIKNQFLRQSSPLSKVIFDDKINISHHA LGLHSYVARVQGNKIKAKNEIRISSRLKRVPEPLLRMVVVHELAHLKEKDHNKAFYNLCTHMEPDYHQFEFDLRLLLTCI DANISPYSADKADT
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082207, Length=158, Percent_Identity=56.3291139240506, Blast_Score=191, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002725 [H]
Pfam domain/function: PF01863 DUF45 [H]
EC number: NA
Molecular weight: Translated: 20093; Mature: 20093
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLKYLSGYSPDIQQQVQQHLDAGTLPKLLLKRHPVIHSVRSDKALYDYTQAIKNQFLR CCCHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH QSSPLSKVIFDDKINISHHALGLHSYVARVQGNKIKAKNEIRISSRLKRVPEPLLRMVVV CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH HELAHLKEKDHNKAFYNLCTHMEPDYHQFEFDLRLLLTCIDANISPYSADKADT HHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNPLKYLSGYSPDIQQQVQQHLDAGTLPKLLLKRHPVIHSVRSDKALYDYTQAIKNQFLR CCCHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH QSSPLSKVIFDDKINISHHALGLHSYVARVQGNKIKAKNEIRISSRLKRVPEPLLRMVVV CCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHH HELAHLKEKDHNKAFYNLCTHMEPDYHQFEFDLRLLLTCIDANISPYSADKADT HHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]