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The map label for this gene is 160874765

Identifier: 160874765

GI number: 160874765

Start: 1989269

End: 1990177

Strand: Reverse

Name: 160874765

Synonym: Sbal195_1648

Alternate gene names: NA

Gene position: 1990177-1989269 (Counterclockwise)

Preceding gene: 160874766

Following gene: 160874764

Centisome position: 37.22

GC content: 49.39

Gene sequence:

>909_bases
TTGACTCTGATCCCACTGGTTTATCACGCCAGCTATTCCAAGCTGGCGCTTCCTCCTCATCACAGATTTCCCACGACCAA
GTACGCGAATTTACGGCAGTACTTACTCGAGAATCAGCTTGCCACACCAGCCCAGTTCCACACGCCAACGGCGATGACAG
CGCAGGATGTAATGCAAGTGCATCAACGCGAGTACGTAGAGCAGTTTATCGCGGGCACTTTGCCAACAGCGGCGCTTAGA
CGGATTGGTTTTCCGTGGAGTGAAGCCTTAGTTGAGCGCACCTTGCATTCTGTGGCAGGCACCACTCTCACAGCTTCATT
GGCCATTAATCAGGGTATTGGCCTGCACCTAACGGGTGGCTATCATCACGCCCATTACGATTTTGGCAGTGGCTATTGTA
TTTTCAACGATCTTATCCTCGCGGCCCAAAATGCCATCGCGAGCCAGCAAGTGCACAAGGTACTGATTTTTGATTGCGAT
GTGCATCAAGGTGACGGTAGTGCAACACTCAGCCAGCGACATCAAGGGATAATCAGTTGCTCGATTCACTGCAAAGAGAA
CTTCCCGAGTCGTAAGCAGCATTCCCACCATGATATTGAGCTAACCAAAGGCAGCGATGACAATCTGTATCTCGAAACCG
TGGAGCAAACACTCGCCCTGCTCATTCGCATCCATCAGCCAGATCTCATTCTTTATGATGCTGGGGTCGATATCCATCAA
AATGATGATCTCGGCTTGCTCAATATCAGTCAAGAAGGGCTGTTCAGACGGGATTTAACTGTGTTATCAATGGCAAAATC
GGAAAATATTCCAATTGCTGCCGTGATAGGCGGCGGCTACAGCAGAGACGCACTACAATTAAGCCAAAGACACAGCCAAC
TTTTTATTGCGGCAAACCATTTGTGGTAG

Upstream 100 bases:

>100_bases
AATACTGGTGGTTACAAGCGGATGAGAAAACACGTAAAGAATTTATGAGCTGGGCAATTTCACAGTTATAACGACTTACG
ATAACGAGGTTTAGTCAATA

Downstream 100 bases:

>100_bases
CAAACTCAATGAAAACCGTCATGGAGCATAACGATGCAACTCGAAATCCGTAATTACTACGAAGTTCTTTTAATGGAAAT
ATTGTCAGATGAAGGACTTA

Product: histone deacetylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTLIPLVYHASYSKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQVHQREYVEQFIAGTLPTAALR
RIGFPWSEALVERTLHSVAGTTLTASLAINQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCD
VHQGDGSATLSQRHQGIISCSIHCKENFPSRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQPDLILYDAGVDIHQ
NDDLGLLNISQEGLFRRDLTVLSMAKSENIPIAAVIGGGYSRDALQLSQRHSQLFIAANHLW

Sequences:

>Translated_302_residues
MTLIPLVYHASYSKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQVHQREYVEQFIAGTLPTAALR
RIGFPWSEALVERTLHSVAGTTLTASLAINQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCD
VHQGDGSATLSQRHQGIISCSIHCKENFPSRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQPDLILYDAGVDIHQ
NDDLGLLNISQEGLFRRDLTVLSMAKSENIPIAAVIGGGYSRDALQLSQRHSQLFIAANHLW
>Mature_301_residues
TLIPLVYHASYSKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQVHQREYVEQFIAGTLPTAALRR
IGFPWSEALVERTLHSVAGTTLTASLAINQGIGLHLTGGYHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDV
HQGDGSATLSQRHQGIISCSIHCKENFPSRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQPDLILYDAGVDIHQN
DDLGLLNISQEGLFRRDLTVLSMAKSENIPIAAVIGGGYSRDALQLSQRHSQLFIAANHLW

Specific function: Putative deacetylase [H]

COG id: COG0123

COG function: function code BQ; Deacetylases, including yeast histone deacetylase and acetoin utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the histone deacetylase family [H]

Homologues:

Organism=Homo sapiens, GI217272877, Length=296, Percent_Identity=28.3783783783784, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI209862883, Length=272, Percent_Identity=27.9411764705882, Blast_Score=131, Evalue=9e-31,
Organism=Homo sapiens, GI13128860, Length=271, Percent_Identity=24.3542435424354, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI293336691, Length=243, Percent_Identity=23.4567901234568, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI13128862, Length=198, Percent_Identity=26.2626262626263, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193207430, Length=299, Percent_Identity=26.4214046822742, Blast_Score=120, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17537347, Length=181, Percent_Identity=37.0165745856354, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17508561, Length=197, Percent_Identity=27.4111675126904, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17540332, Length=176, Percent_Identity=28.9772727272727, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193206283, Length=176, Percent_Identity=28.9772727272727, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17540334, Length=176, Percent_Identity=28.9772727272727, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6323999, Length=272, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6321244, Length=256, Percent_Identity=26.953125, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6325325, Length=182, Percent_Identity=31.8681318681319, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24649807, Length=293, Percent_Identity=25.2559726962457, Blast_Score=112, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24657891, Length=271, Percent_Identity=26.1992619926199, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24644244, Length=265, Percent_Identity=22.6415094339623, Blast_Score=71, Evalue=9e-13,
Organism=Drosophila melanogaster, GI281360899, Length=265, Percent_Identity=26.0377358490566, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24642142, Length=265, Percent_Identity=26.0377358490566, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24642146, Length=265, Percent_Identity=26.0377358490566, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24642144, Length=265, Percent_Identity=26.0377358490566, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000286 [H]

Pfam domain/function: PF00850 Hist_deacetyl [H]

EC number: NA

Molecular weight: Translated: 33622; Mature: 33490

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLIPLVYHASYSKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQV
CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HQREYVEQFIAGTLPTAALRRIGFPWSEALVERTLHSVAGTTLTASLAINQGIGLHLTGG
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECC
YHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDGSATLSQRHQGIISC
EEEEEEECCCCEEHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHCCCEEEE
SIHCKENFPSRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQPDLILYDAGVDIHQ
EEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCEEC
NDDLGLLNISQEGLFRRDLTVLSMAKSENIPIAAVIGGGYSRDALQLSQRHSQLFIAANH
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECC
LW
CC
>Mature Secondary Structure 
TLIPLVYHASYSKLALPPHHRFPTTKYANLRQYLLENQLATPAQFHTPTAMTAQDVMQV
EEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
HQREYVEQFIAGTLPTAALRRIGFPWSEALVERTLHSVAGTTLTASLAINQGIGLHLTGG
HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECC
YHHAHYDFGSGYCIFNDLILAAQNAIASQQVHKVLIFDCDVHQGDGSATLSQRHQGIISC
EEEEEEECCCCEEHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCHHHHHCCCEEEE
SIHCKENFPSRKQHSHHDIELTKGSDDNLYLETVEQTLALLIRIHQPDLILYDAGVDIHQ
EEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHEEECCCCEEEEECCCCEEC
NDDLGLLNISQEGLFRRDLTVLSMAKSENIPIAAVIGGGYSRDALQLSQRHSQLFIAANH
CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECC
LW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7678591 [H]