Click here to switch to the map view.

The map label for this gene is betI [H]

Identifier: 160874468

GI number: 160874468

Start: 1606181

End: 1606786

Strand: Direct

Name: betI [H]

Synonym: Sbal195_1349

Alternate gene names: 160874468

Gene position: 1606181-1606786 (Clockwise)

Preceding gene: 160874464

Following gene: 160874469

Centisome position: 30.04

GC content: 47.19

Gene sequence:

>606_bases
ATGCCTAAAGCCGCAATGAAATTGATACGCAGACAGCAGCTTATCGATGCGACATTAGCATCGGTTGCCTTGCATGGATT
GCAGCACACGACTATCAACAGCATTAGTCAGTTGGCGGGGATGTCGTCGGGGATCATCAGTCATTATTTCAGTGGTAAGC
AGGGCTTGATCCAAGCGACGCTGCGTCACTTACTCGAGCAGTTAAAGCAGGCGTTGCTCAATCGAATCCAAGGACAAGTG
TTGGCGCCAACAGAGCGCTTAATGATGATAGTTGAAGTGAATTTTACCGAGTTACAGCGCTCACGAAATGTCACTCACAC
TTGGCTGAGTTTTTGGGCACAAGCCGTCCACGATCCCCAGTTAGCCCGTTTGCAGAATATTAATAGTCGCCGCTTATACA
GCAACTTACATTTTTCCTTTCGGCATGTGTTGCCCAAAGAGTTTGCCCTGATGGCTGCTGAGCAAACGGCGGCGATGATC
GATGGATTTTGGTTACGTAGCGCTTTAAGTGAAACCCCTGAGCAGGATTTTGTTCAGGCCGAAAAATTATGCAAAACCTT
TATCCACAATGTGATAAAGCAGCATGGAGTCAATACATGTCAGTAG

Upstream 100 bases:

>100_bases
AGGTTGATAGTTACATCACTAATCATTATCATGATTGTTAATTGAACGTTCAATTAACGTCGTTCAGAGTATTGAGAGAG
TGGTTATTCCTTGAGTATTT

Downstream 100 bases:

>100_bases
AAGTACAGTACAACTTTATTTCGGGTCAGTTGCTCGCTAACGATAGCGGCGAAACCTTCGACGTCATCAATCCTGCCACT
GGGCAATTGGCGTATCGAGT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQV
LAPTERLMMIVEVNFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMI
DGFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVNTCQ

Sequences:

>Translated_201_residues
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQV
LAPTERLMMIVEVNFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMI
DGFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVNTCQ
>Mature_200_residues
PKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQATLRHLLEQLKQALLNRIQGQVL
APTERLMMIVEVNFTELQRSRNVTHTWLSFWAQAVHDPQLARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMID
GFWLRSALSETPEQDFVQAEKLCKTFIHNVIKQHGVNTCQ

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=189, Percent_Identity=48.6772486772487, Blast_Score=167, Evalue=6e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22837; Mature: 22706

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
LRHLLEQLKQALLNRIQGQVLAPTERLMMIVEVNFTELQRSRNVTHTWLSFWAQAVHDPQ
HHHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHH
LARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMIDGFWLRSALSETPEQDFVQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKLCKTFIHNVIKQHGVNTCQ
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PKAAMKLIRRQQLIDATLASVALHGLQHTTINSISQLAGMSSGIISHYFSGKQGLIQAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH
LRHLLEQLKQALLNRIQGQVLAPTERLMMIVEVNFTELQRSRNVTHTWLSFWAQAVHDPQ
HHHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCHH
LARLQNINSRRLYSNLHFSFRHVLPKEFALMAAEQTAAMIDGFWLRSALSETPEQDFVQA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKLCKTFIHNVIKQHGVNTCQ
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA