| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874464
Identifier: 160874464
GI number: 160874464
Start: 1602246
End: 1602614
Strand: Direct
Name: 160874464
Synonym: Sbal195_1345
Alternate gene names: NA
Gene position: 1602246-1602614 (Clockwise)
Preceding gene: 160874463
Following gene: 160874468
Centisome position: 29.96
GC content: 48.51
Gene sequence:
>369_bases ATGAAATATTACAGTCGCCGTTTAGTTAAACCTGAACATTTAAATCCAGCAAATACCCTGTTTGGCGGTCAGTTGCTCAG TTGGATAGACGAGGAGGCCGCTATTTTTGCTGCCTGCCAGATGAAGAGCACCAGCCATGTGACTAAGCTGATTTCTGAAA TCAACTTTATGACGCCAGCGCATCAAGGTGATGTGATTGAGTTTGGTCTGGAGCTGGTGAGCCTCGGCCACAGTTCTATT ACTGTCAGCTGCCAAGTGCGTAATAAGATGACGCAGGCGCCGGTGGTGAGCATAGATAAGATGGTGTTTGTGCATGTGAA TACCCAAGGATTGCCTGTGCCCCATGGTATTCGGGCGAATGCGGCTTAG
Upstream 100 bases:
>100_bases TTTAATGGCTATCAATTGTGGCCTGAAAAATGCTCTGAATACAGTGGGAAGTTATAGCGTATTAAAGCTGATTGTTGGCA TTCACATTGAGGTCACCGCC
Downstream 100 bases:
>100_bases TGGGCGCGGAGCTTGAAATGCGTGATGCTTAAAGTAGGTTATTTAAAATGTATAAGACGCTTAAAACAGACAGTGACGCC TAGGCGCCACAGTAATTAGT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Acyl-CoA Thioester Hydrolase; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein; Acyl-CoA Hydrolase; Thioesterase Family Protein; Long-Chain Acyl-CoA Thioester Hydrolase; Acyl-CoA Hydrolase Family Protein; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase Domain-Containing Protein
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKYYSRRLVKPEHLNPANTLFGGQLLSWIDEEAAIFAACQMKSTSHVTKLISEINFMTPAHQGDVIEFGLELVSLGHSSI TVSCQVRNKMTQAPVVSIDKMVFVHVNTQGLPVPHGIRANAA
Sequences:
>Translated_122_residues MKYYSRRLVKPEHLNPANTLFGGQLLSWIDEEAAIFAACQMKSTSHVTKLISEINFMTPAHQGDVIEFGLELVSLGHSSI TVSCQVRNKMTQAPVVSIDKMVFVHVNTQGLPVPHGIRANAA >Mature_122_residues MKYYSRRLVKPEHLNPANTLFGGQLLSWIDEEAAIFAACQMKSTSHVTKLISEINFMTPAHQGDVIEFGLELVSLGHSSI TVSCQVRNKMTQAPVVSIDKMVFVHVNTQGLPVPHGIRANAA
Specific function: Unknown
COG id: COG1607
COG function: function code I; Acyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13417; Mature: 13417
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYYSRRLVKPEHLNPANTLFGGQLLSWIDEEAAIFAACQMKSTSHVTKLISEINFMTPA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC HQGDVIEFGLELVSLGHSSITVSCQVRNKMTQAPVVSIDKMVFVHVNTQGLPVPHGIRAN CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECEEEEEEECCCCCCCCCCCCCC AA CC >Mature Secondary Structure MKYYSRRLVKPEHLNPANTLFGGQLLSWIDEEAAIFAACQMKSTSHVTKLISEINFMTPA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC HQGDVIEFGLELVSLGHSSITVSCQVRNKMTQAPVVSIDKMVFVHVNTQGLPVPHGIRAN CCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEECEEEEEEECCCCCCCCCCCCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA