| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is thrB [H]
Identifier: 160874424
GI number: 160874424
Start: 1545951
End: 1546913
Strand: Direct
Name: thrB [H]
Synonym: Sbal195_1305
Alternate gene names: 160874424
Gene position: 1545951-1546913 (Clockwise)
Preceding gene: 160874423
Following gene: 160874425
Centisome position: 28.91
GC content: 49.95
Gene sequence:
>963_bases ATGAGTTTGACCGTTTACGCTCCAGCCTCTATGGGTAACGTGGGAGTCGGATTTGATTTACTGGGCGCCGCTTTGGCGCC TATCGATGGCAGTTTACTCGGCGACAGAGTGACTATCGCGGCGGCAGAATCGGGTGTGAGTCTGGCGCAAACCGGTGCTT GGGCCCATAAACTGCCTGAAAATCCGCAAGACAATATAGTTTACCAATGTGCCGAATTCTTCTTAACCGCCCTGAGTAAG GAGTATTTAGACGCGATTGGTAAAGCAGATGAAGGCGTAGCGCTGACACTGGAAAAGAACCTGCCCGTCGGCAGTGGTTT AGGTTCGAGTGCAAGCTCAGTCGTGGCGGCGTTATATGCACTGAATGAACATTTTGACAGACCTTATAACGAGCAAGCAC TGCTGGAACTGATGGGCGAGTTTGAAGGTAAGATCAGCGGCAGTGTGCACTATGACAACGTCGCCCCCTGTTATTTGGGC GGCATGCAATTGATGCTCAATGTGCCGGGCACTGTATGTGAAGCGATACCGAGTTTTAAAGAATGGTATTGGGTTGTGGC CTATCCTGGGATTTCACTTTCGACGGCGATGATGCGTAAACTCATGCCTGATCAATACGATAAAAGTGTCACTATCGATT TTGGCCGCTATTTAAGTGCCTTTGTACATGCCTCTTATCAGCAGAATGCCAAGCTTGCGATCAGCGTATTAAAAGATGTG TTAGCCGAGCCTTATCGCGCAGCTGCGATTCCGGGTTACGACAATGCCAGAGTTGCTTTAGCCGATTTAGGCATGTTGAC TACGGGGATTTCCGGCAGTGGTCCAACGCTGTTTTCGATTACCGATGATTTAGCCACGGCAAATGCGGCTAAAACCTGGT TAGAACAGCATTATTTAACCGAGGTGGGTGGCTTTGCCCACGTGTGTCGCCTCGATGAGCAAGGCACGCGTAGAGTCGAT TAA
Upstream 100 bases:
>100_bases CGTTTGTGCTGCGCGGTTATGGCGCGGGAACGGAAGTGACTGCCGCTGGCGCTTTTGCCGATGTATTAAGAACCTTGAAT TGGACTCGTGAGGTGAGTGT
Downstream 100 bases:
>100_bases TTCTTATTTTTAGTATCAAGACTAAGCATTAAGGCTAAATATCCATCTTATGCATAAAAAGCATGCATCAAGAATTAGCA TTTAAGGCTTAGCATCAAAA
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDRVTIAAAESGVSLAQTGAWAHKLPENPQDNIVYQCAEFFLTALSK EYLDAIGKADEGVALTLEKNLPVGSGLGSSASSVVAALYALNEHFDRPYNEQALLELMGEFEGKISGSVHYDNVAPCYLG GMQLMLNVPGTVCEAIPSFKEWYWVVAYPGISLSTAMMRKLMPDQYDKSVTIDFGRYLSAFVHASYQQNAKLAISVLKDV LAEPYRAAAIPGYDNARVALADLGMLTTGISGSGPTLFSITDDLATANAAKTWLEQHYLTEVGGFAHVCRLDEQGTRRVD
Sequences:
>Translated_320_residues MSLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDRVTIAAAESGVSLAQTGAWAHKLPENPQDNIVYQCAEFFLTALSK EYLDAIGKADEGVALTLEKNLPVGSGLGSSASSVVAALYALNEHFDRPYNEQALLELMGEFEGKISGSVHYDNVAPCYLG GMQLMLNVPGTVCEAIPSFKEWYWVVAYPGISLSTAMMRKLMPDQYDKSVTIDFGRYLSAFVHASYQQNAKLAISVLKDV LAEPYRAAAIPGYDNARVALADLGMLTTGISGSGPTLFSITDDLATANAAKTWLEQHYLTEVGGFAHVCRLDEQGTRRVD >Mature_319_residues SLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDRVTIAAAESGVSLAQTGAWAHKLPENPQDNIVYQCAEFFLTALSKE YLDAIGKADEGVALTLEKNLPVGSGLGSSASSVVAALYALNEHFDRPYNEQALLELMGEFEGKISGSVHYDNVAPCYLGG MQLMLNVPGTVCEAIPSFKEWYWVVAYPGISLSTAMMRKLMPDQYDKSVTIDFGRYLSAFVHASYQQNAKLAISVLKDVL AEPYRAAAIPGYDNARVALADLGMLTTGISGSGPTLFSITDDLATANAAKTWLEQHYLTEVGGFAHVCRLDEQGTRRVD
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=315, Percent_Identity=53.6507936507937, Blast_Score=351, Evalue=3e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 34190; Mature: 34059
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDRVTIAAAESGVSLAQTGAWAHKLPE CCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCHHHCCCC NPQDNIVYQCAEFFLTALSKEYLDAIGKADEGVALTLEKNLPVGSGLGSSASSVVAALYA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH LNEHFDRPYNEQALLELMGEFEGKISGSVHYDNVAPCYLGGMQLMLNVPGTVCEAIPSFK HHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHCCCHHEEECCHHHHHHCCCHH EWYWVVAYPGISLSTAMMRKLMPDQYDKSVTIDFGRYLSAFVHASYQQNAKLAISVLKDV HCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH LAEPYRAAAIPGYDNARVALADLGMLTTGISGSGPTLFSITDDLATANAAKTWLEQHYLT HCCCHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH EVGGFAHVCRLDEQGTRRVD HHCCHHHHHCCCCCCCCCCC >Mature Secondary Structure SLTVYAPASMGNVGVGFDLLGAALAPIDGSLLGDRVTIAAAESGVSLAQTGAWAHKLPE CEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCHHHCCCC NPQDNIVYQCAEFFLTALSKEYLDAIGKADEGVALTLEKNLPVGSGLGSSASSVVAALYA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH LNEHFDRPYNEQALLELMGEFEGKISGSVHYDNVAPCYLGGMQLMLNVPGTVCEAIPSFK HHHHHCCCCCHHHHHHHHHHHCCCCCCCEECCCCCHHHHCCCHHEEECCHHHHHHCCCHH EWYWVVAYPGISLSTAMMRKLMPDQYDKSVTIDFGRYLSAFVHASYQQNAKLAISVLKDV HCEEEEEECCCCHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHH LAEPYRAAAIPGYDNARVALADLGMLTTGISGSGPTLFSITDDLATANAAKTWLEQHYLT HCCCHHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH EVGGFAHVCRLDEQGTRRVD HHCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8423151 [H]