| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874301
Identifier: 160874301
GI number: 160874301
Start: 1400987
End: 1402141
Strand: Direct
Name: 160874301
Synonym: Sbal195_1181
Alternate gene names: NA
Gene position: 1400987-1402141 (Clockwise)
Preceding gene: 160874300
Following gene: 160874302
Centisome position: 26.2
GC content: 47.97
Gene sequence:
>1155_bases ATGGGGACGACACAGACTAACGCAATTGCGCCAGTAAAGGTGAATAAACCTAGGTTGATGTCGCTGGATGCACTGCGCGG CTTCGATATGTTTTGGATTTTGGGCGGTGAGGCTTTGTTTGGTGGCTTGCTTATTCTAACGGGCTGGGCAGGTTGGCAAT GGGGCGATGAACAAATGCACCATAGCCAATGGCATGGTTTTCACTTCTACGATTTGATTTTTCCGCTGTTTATTTTCCTC TCTGGTGTGGCCTTAGGTTTATCCCCTAAACGTTTAGATAAATTACCTATGAAGGAGCGATTACCTGTGTATCGTCATGG GATTAAACGACTCTTTTTATTGCTGTTACTAGGCATTTTATACAATCACGGTTGGGGAACTGGCGCGCCTGCCGATCCTG AAAAAATTCGTTATGCTAGTGTGTTAGGTCGAATCGCCTTTGCATGGTTTTTTGCCGCATTATTGGTGTGGCACACGAGT CTACGAACCCAAATTATCGTCGCCTTGGGCATTTTGCTTGGTTATGGCGCAATGCAACTTTGGTTGCCTTTTCCCGGTGG ACAGGCAAGCGTGCTCTCGCCAACGGAATCCATCAATGCCTATGTCGATTCGATTTTATTACCCGGCGTGAGCTATCAGG GACGCACGCCCGATCCAGAGGGTTTACTGTCGACTATTCCCGCCATCGTCAATGCGTTAGCGGGTGTGTTTGTCGGCCAC TTTATTGTTAAATCCCATCCTAAAGGTGAGTGGGCCAAAGTGGGATTGCTCGCCGCTGCGGGTTGCGTTTGTTTAGCCTT TGGTTGGCTGTTGGATCTTGTCATTCCGGTCAATAAAGAGCTGTGGACCAGTTCATTTGTCCTAGTGACGTCGGGTTGGA GCATGATACTGCTGGCGGTATTCTATGCCTTAGTCGATGTGCTTAAGTGGCAAAAAGCCGCATTTTTCTTCGTGGTGATA GGCACCAACGCCATTATTATTTACTTAGCGTCGAGCTTAGTGGATTGGAAATATATCGCTCAAAGCGTGTTTGGCGGCTT AGTGCTGGCCTTGCCTGAAAGCGCTCAAGCGTTAGCTGCGGTTATCAGCTTGCTCGCGGTGCAGTGGCTGGTTTTATATT GGATGTATCGCCGCAATATTTTTGTCAGAATTTAG
Upstream 100 bases:
>100_bases TATTGTACAGCACTAATTTTAAACAGTATTAGTTTTGTACAGTATTAGTTTTGCTCAACTTTTATAAAAGCTTTTAATAA CAATAATAAAGGATGATGGC
Downstream 100 bases:
>100_bases TCAGTTGGCTTAATAGCTTGAGATCAGCCGCACGCACTCAGTGTCTGCGGCTTTTTTTACATTATTTTATGGATGTGAGT TACAACTTAGCTATCGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWQWGDEQMHHSQWHGFHFYDLIFPLFIFL SGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTS LRTQIIVALGILLGYGAMQLWLPFPGGQASVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFVGH FIVKSHPKGEWAKVGLLAAAGCVCLAFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLAVFYALVDVLKWQKAAFFFVVI GTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI
Sequences:
>Translated_384_residues MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWQWGDEQMHHSQWHGFHFYDLIFPLFIFL SGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTS LRTQIIVALGILLGYGAMQLWLPFPGGQASVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFVGH FIVKSHPKGEWAKVGLLAAAGCVCLAFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLAVFYALVDVLKWQKAAFFFVVI GTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI >Mature_383_residues GTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWQWGDEQMHHSQWHGFHFYDLIFPLFIFLS GVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTSL RTQIIVALGILLGYGAMQLWLPFPGGQASVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFVGHF IVKSHPKGEWAKVGLLAAAGCVCLAFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLAVFYALVDVLKWQKAAFFFVVIG TNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAAVISLLAVQWLVLYWMYRRNIFVRI
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=433, Percent_Identity=25.8660508083141, Blast_Score=83, Evalue=4e-16, Organism=Drosophila melanogaster, GI24639786, Length=374, Percent_Identity=24.8663101604278, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42471; Mature: 42340
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWQWGDEQMH CCCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEECCHHHHHHHHHEECCCCCCCCHHHHH HSQWHGFHFYDLIFPLFIFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGIL HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHH YNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTSLRTQIIVALGILLGYGAMQL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE WLPFPGGQASVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFVGH EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FIVKSHPKGEWAKVGLLAAAGCVCLAFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLAV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHHHHHHH FYALVDVLKWQKAAFFFVVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAA HHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH VISLLAVQWLVLYWMYRRNIFVRI HHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure GTTQTNAIAPVKVNKPRLMSLDALRGFDMFWILGGEALFGGLLILTGWAGWQWGDEQMH CCCCCCCEEEEECCCCCEEEHHHHCCCCEEEEECCHHHHHHHHHEECCCCCCCCHHHHH HSQWHGFHFYDLIFPLFIFLSGVALGLSPKRLDKLPMKERLPVYRHGIKRLFLLLLLGIL HHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHH YNHGWGTGAPADPEKIRYASVLGRIAFAWFFAALLVWHTSLRTQIIVALGILLGYGAMQL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEE WLPFPGGQASVLSPTESINAYVDSILLPGVSYQGRTPDPEGLLSTIPAIVNALAGVFVGH EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH FIVKSHPKGEWAKVGLLAAAGCVCLAFGWLLDLVIPVNKELWTSSFVLVTSGWSMILLAV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEECCHHHHHHHH FYALVDVLKWQKAAFFFVVIGTNAIIIYLASSLVDWKYIAQSVFGGLVLALPESAQALAA HHHHHHHHHHHHHEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHH VISLLAVQWLVLYWMYRRNIFVRI HHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA