| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874284
Identifier: 160874284
GI number: 160874284
Start: 1379914
End: 1380306
Strand: Direct
Name: 160874284
Synonym: Sbal195_1164
Alternate gene names: NA
Gene position: 1379914-1380306 (Clockwise)
Preceding gene: 160874283
Following gene: 160874285
Centisome position: 25.81
GC content: 41.22
Gene sequence:
>393_bases ATGAAGGTTCAATGTAAAGGTTTTACACTAATTGAAGTTATGATAACGGTTGTTATTATCGGAATCTTAGCTGCTATTGC TTACCCATCCTACACTCAATACATAGCATTGAGTGCTAGGTCGGAAGGATTGGCTGCATTAATGCGTATTGCAAATTTAC AAGAGCAGTATTACTTAGATAATCGTGTCTATGCAACTGATTTAACTAAATTAGTTGGCGCAAATCCTTATGTGACAGAG CATCAGCACTACTCAGTGTCATCAAGTGGGACGTCTAGCTTTACGATTAAGGCTGTTGCTCAGGGCGTTCAGGCTAGCCG TGATGCTTCTTGCTCTCCTTTAACAATATCAGATACTGGGGCAAAAGGTCCGAGTGCGGAGTGTTGGAAATGA
Upstream 100 bases:
>100_bases AGAAAAACAAAGATGGTGAATATAGTGGAACGATAAATGTGGCCTCTGGTTTAGGGGTGAATAAAATTTATTATCATATA AATGAATGAGTTATTAATTT
Downstream 100 bases:
>100_bases AATTAGTGAACCTCGTTATCGCAGCCGTTTTATTGCCTAACTTAGTTTGGGCAGATACTAGCGTTACTGTCAGCGAGCAG GACTTTAAATGCTATATTAC
Product: type IV pilus biogenesis protein PilE
Products: NA
Alternate protein names: Methylation Site Containing Protein; Type 4 Fimbrial Biogenesis Protein PilE; Fimbrial Protein Pilin; Type IV Pilin; Type 4 Fimbrial Biogenesis Transmembrane Protein; Methylation; Fimbrial Protein; Pilus Assembly Protein; Prepilin Like Protein; Type IV Pilus Assembly Protein PilE; Pilus Assembly Protein PilE; General Secretion Pathway Protein H; Tfp Pilus Assembly Protein PilE-Like Protein; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKVQCKGFTLIEVMITVVIIGILAAIAYPSYTQYIALSARSEGLAALMRIANLQEQYYLDNRVYATDLTKLVGANPYVTE HQHYSVSSSGTSSFTIKAVAQGVQASRDASCSPLTISDTGAKGPSAECWK
Sequences:
>Translated_130_residues MKVQCKGFTLIEVMITVVIIGILAAIAYPSYTQYIALSARSEGLAALMRIANLQEQYYLDNRVYATDLTKLVGANPYVTE HQHYSVSSSGTSSFTIKAVAQGVQASRDASCSPLTISDTGAKGPSAECWK >Mature_130_residues MKVQCKGFTLIEVMITVVIIGILAAIAYPSYTQYIALSARSEGLAALMRIANLQEQYYLDNRVYATDLTKLVGANPYVTE HQHYSVSSSGTSSFTIKAVAQGVQASRDASCSPLTISDTGAKGPSAECWK
Specific function: Unknown
COG id: COG4968
COG function: function code NU; Tfp pilus assembly protein PilE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13987; Mature: 13987
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVQCKGFTLIEVMITVVIIGILAAIAYPSYTQYIALSARSEGLAALMRIANLQEQYYLD CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHCC NRVYATDLTKLVGANPYVTEHQHYSVSSSGTSSFTIKAVAQGVQASRDASCSPLTISDTG CEEEHHHHHHHHCCCCCEECCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCC AKGPSAECWK CCCCCCCCCC >Mature Secondary Structure MKVQCKGFTLIEVMITVVIIGILAAIAYPSYTQYIALSARSEGLAALMRIANLQEQYYLD CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHCC NRVYATDLTKLVGANPYVTEHQHYSVSSSGTSSFTIKAVAQGVQASRDASCSPLTISDTG CEEEHHHHHHHHCCCCCEECCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCC AKGPSAECWK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA