| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874282
Identifier: 160874282
GI number: 160874282
Start: 1375932
End: 1376393
Strand: Direct
Name: 160874282
Synonym: Sbal195_1162
Alternate gene names: NA
Gene position: 1375932-1376393 (Clockwise)
Preceding gene: 160874281
Following gene: 160874283
Centisome position: 25.73
GC content: 42.21
Gene sequence:
>462_bases ATGAAAAAGCAAAAGGGAATAGTATTATTTTTTGCTCTGATTGTATTGTTACTTATGACAATTATCGGTGTTGCTTTAGC TGTTAATTCAACCCAGTCCATGCGTATGTCTGGAGCAGGCTCAGAGCGAATAGAAGCGAAGTCAATTGCCGATGGCGGTT TAGAAGCTGCAATTGAAGCAAATAAAGGCGCTAGCTTAGCCAAATTATCTGAGATTTCATCTGTAGCTGAATTTGGTTCT AACCAAACATTAACGCCAATTCCTTACGAAGTTGATGGAGCTGGCAATGTCGTCACCAGTGCTAAAGATGTCGGCTGTCA ACGCAGTGCAAGGCCTAATAGTGGTAATTTAATCAGTTGTCGGCGGATTGAAATTAGTAGTACTGCCGCTTTTGGTCGGG ATAATTTAGGTCAGCTCACTGTAGTCGCAGGTGTGGAGCAAGAAGTTTTAACTGGGAGTTAG
Upstream 100 bases:
>100_bases AGAAATTAAGAATTTGAATGATCATTATCGCCGCAAGATTGTCTCGACGACTATGGTACTTGCTAACCCTGTACTAATTA GAAACTAGAAGGCTGGTGGC
Downstream 100 bases:
>100_bases ATATGATTATTAAAGAGCTGGCTTGTTCTACACTACTAGTACTGACTTTTGTGTCGGCTTATTCCTTTGGTGATGATACT GAATTGTATGTAAAAGAGTC
Product: type IV pilus assembly protein PilX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKKQKGIVLFFALIVLLLMTIIGVALAVNSTQSMRMSGAGSERIEAKSIADGGLEAAIEANKGASLAKLSEISSVAEFGS NQTLTPIPYEVDGAGNVVTSAKDVGCQRSARPNSGNLISCRRIEISSTAAFGRDNLGQLTVVAGVEQEVLTGS
Sequences:
>Translated_153_residues MKKQKGIVLFFALIVLLLMTIIGVALAVNSTQSMRMSGAGSERIEAKSIADGGLEAAIEANKGASLAKLSEISSVAEFGS NQTLTPIPYEVDGAGNVVTSAKDVGCQRSARPNSGNLISCRRIEISSTAAFGRDNLGQLTVVAGVEQEVLTGS >Mature_153_residues MKKQKGIVLFFALIVLLLMTIIGVALAVNSTQSMRMSGAGSERIEAKSIADGGLEAAIEANKGASLAKLSEISSVAEFGS NQTLTPIPYEVDGAGNVVTSAKDVGCQRSARPNSGNLISCRRIEISSTAAFGRDNLGQLTVVAGVEQEVLTGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15814; Mature: 15814
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQKGIVLFFALIVLLLMTIIGVALAVNSTQSMRMSGAGSERIEAKSIADGGLEAAIEA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHCCCCCEEEEEC NKGASLAKLSEISSVAEFGSNQTLTPIPYEVDGAGNVVTSAKDVGCQRSARPNSGNLISC CCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEECCHHHCCCCCCCCCCCCCEEEE RRIEISSTAAFGRDNLGQLTVVAGVEQEVLTGS EEEEECCCCCCCCCCCCCEEEEECCCHHHCCCC >Mature Secondary Structure MKKQKGIVLFFALIVLLLMTIIGVALAVNSTQSMRMSGAGSERIEAKSIADGGLEAAIEA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCHHHHHCCCCCEEEEEC NKGASLAKLSEISSVAEFGSNQTLTPIPYEVDGAGNVVTSAKDVGCQRSARPNSGNLISC CCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEECCHHHCCCCCCCCCCCCCEEEE RRIEISSTAAFGRDNLGQLTVVAGVEQEVLTGS EEEEECCCCCCCCCCCCCEEEEECCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA