| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874281
Identifier: 160874281
GI number: 160874281
Start: 1374951
End: 1375919
Strand: Direct
Name: 160874281
Synonym: Sbal195_1161
Alternate gene names: NA
Gene position: 1374951-1375919 (Clockwise)
Preceding gene: 160874280
Following gene: 160874282
Centisome position: 25.71
GC content: 37.77
Gene sequence:
>969_bases ATGGTCAATTCAAGAAACTGTCAGAAAGGGATGTCATTAGTTGAGTTAATGGTCTCTATGGTCATTGGCTTATTTCTCAC TCTTGGGCTTTTTGCCATGTTTAGTATGTCCTCTTCTAATGTAATTACGACGAGCCAATTTAATCAATTACAAGAAAATG GCCGAATTGCTTTATCACTAATGGAAAGAGATATCAGCCAATTGGGTTTTATGGGAGACATAACGGGAACCGATTTTGTA CTTGGGACCAATATAACCTTGAGGGATGGTATTGCAAATGATTGCATTGGTGCAGGCGTAAATAACGGTACTTTACCTAA TGCAGAACCTGCACATTTTAGACGTCTGTGGGGATACGAAGAAGGTAAGAGTGGAGATACGTTAAGTTGCTTATCTGGTG TAAATCAGAATACTGACGTAATTCAAATCAAAAGGTTAGTAGGGCCACCGGTCACTAATCCAGATGGCGAACGTTTTTAT ATGGCAGCAACCTCGAGTGAAGCAGTTATGTTTAAAGGTGGTAATCCGCCTAATCCTGTGCTCGAAAATGCTCGTTTTTG GGAATATCAACATCATGTCTATTTTATTAAAAATGATGGTTCTGTACCTATTTTACGTCGAAAAACGTTAACTAAAAATA ATGGTATGAACAACGAAGAGCAGTTAGTTGAAGGCATAGAGAATATGCGTATTCTCTATGGTTTTGATAGTAACGGAGAT GATACGGCCGATAGTTTTATGCCAGCAGAAAATGTCACAACATTAATGTGGGATAACGAATTATTTCAACGGCTAGTTGC ATTGAGGGTTTTTTTATTGGTTCGTGCTATCGATGAAGATAAAAGTTATACCAATGAAACAACTTACACTTTAGGCGATA AAGAAATTAAGAATTTGAATGATCATTATCGCCGCAAGATTGTCTCGACGACTATGGTACTTGCTAACCCTGTACTAATT AGAAACTAG
Upstream 100 bases:
>100_bases CGGGAACAAGCTATTCAGGCAGTGAATGCGGAAAAGATATTGGTAAACGTAGACGGCTTTTTATTCTTTCGACAGTGATT ATTTAGGTTAATTAATTATT
Downstream 100 bases:
>100_bases AAGGCTGGTGGCATGAAAAAGCAAAAGGGAATAGTATTATTTTTTGCTCTGATTGTATTGTTACTTATGACAATTATCGG TGTTGCTTTAGCTGTTAATT
Product: type IV pilus assembly protein PilW
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilW; Type IV Pilus Assembly Protein; Tfp Pilus Assembly Protein PilW-Like Protein; Pilin-Like Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MVNSRNCQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFV LGTNITLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFY MAATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPILRRKTLTKNNGMNNEEQLVEGIENMRILYGFDSNGD DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLI RN
Sequences:
>Translated_322_residues MVNSRNCQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFV LGTNITLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFY MAATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPILRRKTLTKNNGMNNEEQLVEGIENMRILYGFDSNGD DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLI RN >Mature_322_residues MVNSRNCQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSLMERDISQLGFMGDITGTDFV LGTNITLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYEEGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFY MAATSSEAVMFKGGNPPNPVLENARFWEYQHHVYFIKNDGSVPILRRKTLTKNNGMNNEEQLVEGIENMRILYGFDSNGD DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLNDHYRRKIVSTTMVLANPVLI RN
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35989; Mature: 35989
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSRNCQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEEHH MERDISQLGFMGDITGTDFVLGTNITLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYE HHHHHHHHCCCCCCCCCCEEEECCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCC EGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFYMAATSSEAVMFKGGNPPNPV CCCCCCHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH LENARFWEYQHHVYFIKNDGSVPILRRKTLTKNNGMNNEEQLVEGIENMRILYGFDSNGD HCCCEEEEEEEEEEEEECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCC DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLN CCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH DHYRRKIVSTTMVLANPVLIRN HHHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure MVNSRNCQKGMSLVELMVSMVIGLFLTLGLFAMFSMSSSNVITTSQFNQLQENGRIALSL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCEEEHH MERDISQLGFMGDITGTDFVLGTNITLRDGIANDCIGAGVNNGTLPNAEPAHFRRLWGYE HHHHHHHHCCCCCCCCCCEEEECCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCC EGKSGDTLSCLSGVNQNTDVIQIKRLVGPPVTNPDGERFYMAATSSEAVMFKGGNPPNPV CCCCCCHHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCHH LENARFWEYQHHVYFIKNDGSVPILRRKTLTKNNGMNNEEQLVEGIENMRILYGFDSNGD HCCCEEEEEEEEEEEEECCCCCCEEEHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCC DTADSFMPAENVTTLMWDNELFQRLVALRVFLLVRAIDEDKSYTNETTYTLGDKEIKNLN CCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHH DHYRRKIVSTTMVLANPVLIRN HHHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA