| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is mviN [H]
Identifier: 160874274
GI number: 160874274
Start: 1366846
End: 1368405
Strand: Direct
Name: mviN [H]
Synonym: Sbal195_1154
Alternate gene names: 160874274
Gene position: 1366846-1368405 (Clockwise)
Preceding gene: 160874273
Following gene: 160874275
Centisome position: 25.56
GC content: 45.64
Gene sequence:
>1560_bases TTGAGTAGAAAATTATTAAAATCTGGTCTGATTGTTAGTGCTATGACATTGATATCCCGTGTGTTAGGTCTTGTTCGGGA CGTCGTCGTTGCTAACTTGATGGGGGCCGGGACAAGTGCCGATGTGTTTTTCTTCGCCAATAAAATTCCTAACTTTTTAC GTCGTTTGTTTGCAGAAGGGGCTTTTGCACAAGCCTTTGTGCCTGTTTTAACTGAGTATCAAGAGAAACACACCGCGGAA GAAACCCGTGACCTGTTGAGTAAAGTCGCAGGCACATTAGGTTTGTTAGTGACGATTGTGACGCTTGTGGGCGTGGTAGC TTCGCCCGTGTTATCAGCCTTATTTGGCGGTGGTTGGTTTATTGCTTGGCTCAATAATGAGCCCGATGGCGCTAAATTTG AACTCGCTACCGTTGTGCTTAAGATTACTTTCCCTTACCTGTGGTTTATTACCTTTACCGCACTGGCTGGATCGATTTTA AACACCCGAGGCCGATTTGCGGTTTCGGCGTTTACCCCTGTATTCCTCAATGTGGCGATTATTACCGCGGCCATATTTTA TGCGCCAACATCGACTCAACCCGAAATCACCCTTGCTTGGGGCGTTTTTTGTGGCGGATTAATCCAGTTCTTATTTCAAA TTCCTTTTTTGTTGCGTGAAAAAGCGCTCGTTAAACCCTCGTGGGGTTGGCATCACCCTGGAGTAGTGAAAATCAGAACC TTGATGATCCCGGCGCTATTTGGCGTATCGGTTTCACAGATTAACCTGTTATTTGATACCTTTATCGCCAGTTTTTTGAT GACGGGCTCGATAAGCTGGCTCTACTATGCCGACCGTTTATTGGAGTTTCCCCTAGGATTGTTTGGGATCGCGATTGGTA CTGTGATTTTACCTGCGTTGTCACGAAACCATGTCAATGCTGAAGGTGCGGGGTTTGGCTTGACGATGGATTGGGGGGTT AAAGCGATTCTGCTGCTAGGTCTTCCTGCCATGATGGGTTTGATCGTGCTCGCCAAACCTATGCTGATGGTGTTATTTAT GCGCGGCGCTTTTTCGATGCATGATGTTGAAATGGCTTCTTATAGTTTGATGGCTTACGGTAGCGGTTTACTCAGTTTTA TGCTGATTAAAGTACTCGCTCCAGGTTATTACTCCCGCCAAGATACCAAAACTCCTGTGCGTTATGGCATTATCGCCATG ATCACCAACATGGGCTTTAACTTATTGTTTGCTATTCCTTTTGGGTATGTTGGATTAGCGATTGCGACTTCAATGTCAGC ATTGCTCAACGCCACTTTACTTTATCGAGGATTGCATTTAGCCGGCGTTTATCGCGTTTCTAGGCCGACTATGGTGTTTT TTGCTAAAGCCGTGGTCTCTACCGCCTTGATGGTGGTAGTCTTGTATTACTTTTTACCTTCGCAACAAATTTGGTTAGAT TGGCATTTGTTCGAGCGTGCAAAAGCCTTGATAGGCTTGATTTTAGCGGGGGCAGTCAGTTACTTGTTGGGACTGCTTTT GCTCGGAATTCGTCCTTGGTCAATTAAACGGGGAGTTTGA
Upstream 100 bases:
>100_bases TGTGGCGCAATTCTAGCAGCTATTACCGCAGTGTGACAGAGCCTGAATCGATTTTTTGAGATGTATCACCTAATCAATTC GATATGGGTCTGGGGGACGT
Downstream 100 bases:
>100_bases TTGCTGATTCTCATCGCTAGCTGTTATATAATCAGCCGATTTGCGCTTGGCAGTTGTCTAAAGTTATGGAATTAATCCGC GGTATACATAACATTTTGTC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MSRKLLKSGLIVSAMTLISRVLGLVRDVVVANLMGAGTSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKHTAE ETRDLLSKVAGTLGLLVTIVTLVGVVASPVLSALFGGGWFIAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSIL NTRGRFAVSAFTPVFLNVAIITAAIFYAPTSTQPEITLAWGVFCGGLIQFLFQIPFLLREKALVKPSWGWHHPGVVKIRT LMIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYADRLLEFPLGLFGIAIGTVILPALSRNHVNAEGAGFGLTMDWGV KAILLLGLPAMMGLIVLAKPMLMVLFMRGAFSMHDVEMASYSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAM ITNMGFNLLFAIPFGYVGLAIATSMSALLNATLLYRGLHLAGVYRVSRPTMVFFAKAVVSTALMVVVLYYFLPSQQIWLD WHLFERAKALIGLILAGAVSYLLGLLLLGIRPWSIKRGV
Sequences:
>Translated_519_residues MSRKLLKSGLIVSAMTLISRVLGLVRDVVVANLMGAGTSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKHTAE ETRDLLSKVAGTLGLLVTIVTLVGVVASPVLSALFGGGWFIAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSIL NTRGRFAVSAFTPVFLNVAIITAAIFYAPTSTQPEITLAWGVFCGGLIQFLFQIPFLLREKALVKPSWGWHHPGVVKIRT LMIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYADRLLEFPLGLFGIAIGTVILPALSRNHVNAEGAGFGLTMDWGV KAILLLGLPAMMGLIVLAKPMLMVLFMRGAFSMHDVEMASYSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAM ITNMGFNLLFAIPFGYVGLAIATSMSALLNATLLYRGLHLAGVYRVSRPTMVFFAKAVVSTALMVVVLYYFLPSQQIWLD WHLFERAKALIGLILAGAVSYLLGLLLLGIRPWSIKRGV >Mature_518_residues SRKLLKSGLIVSAMTLISRVLGLVRDVVVANLMGAGTSADVFFFANKIPNFLRRLFAEGAFAQAFVPVLTEYQEKHTAEE TRDLLSKVAGTLGLLVTIVTLVGVVASPVLSALFGGGWFIAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSILN TRGRFAVSAFTPVFLNVAIITAAIFYAPTSTQPEITLAWGVFCGGLIQFLFQIPFLLREKALVKPSWGWHHPGVVKIRTL MIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYADRLLEFPLGLFGIAIGTVILPALSRNHVNAEGAGFGLTMDWGVK AILLLGLPAMMGLIVLAKPMLMVLFMRGAFSMHDVEMASYSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMI TNMGFNLLFAIPFGYVGLAIATSMSALLNATLLYRGLHLAGVYRVSRPTMVFFAKAVVSTALMVVVLYYFLPSQQIWLDW HLFERAKALIGLILAGAVSYLLGLLLLGIRPWSIKRGV
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=512, Percent_Identity=41.6015625, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 56731; Mature: 56599
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKLLKSGLIVSAMTLISRVLGLVRDVVVANLMGAGTSADVFFFANKIPNFLRRLFAEG CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AFAQAFVPVLTEYQEKHTAEETRDLLSKVAGTLGLLVTIVTLVGVVASPVLSALFGGGWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNVAI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH ITAAIFYAPTSTQPEITLAWGVFCGGLIQFLFQIPFLLREKALVKPSWGWHHPGVVKIRT HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LMIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYADRLLEFPLGLFGIAIGTVILPAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNHVNAEGAGFGLTMDWGVKAILLLGLPAMMGLIVLAKPMLMVLFMRGAFSMHDVEMAS HCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMITNMGFNLLFAIPFGYVGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IATSMSALLNATLLYRGLHLAGVYRVSRPTMVFFAKAVVSTALMVVVLYYFLPSQQIWLD HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH WHLFERAKALIGLILAGAVSYLLGLLLLGIRPWSIKRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRKLLKSGLIVSAMTLISRVLGLVRDVVVANLMGAGTSADVFFFANKIPNFLRRLFAEG CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC AFAQAFVPVLTEYQEKHTAEETRDLLSKVAGTLGLLVTIVTLVGVVASPVLSALFGGGWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IAWLNNEPDGAKFELATVVLKITFPYLWFITFTALAGSILNTRGRFAVSAFTPVFLNVAI EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH ITAAIFYAPTSTQPEITLAWGVFCGGLIQFLFQIPFLLREKALVKPSWGWHHPGVVKIRT HHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LMIPALFGVSVSQINLLFDTFIASFLMTGSISWLYYADRLLEFPLGLFGIAIGTVILPAL HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRNHVNAEGAGFGLTMDWGVKAILLLGLPAMMGLIVLAKPMLMVLFMRGAFSMHDVEMAS HCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YSLMAYGSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMITNMGFNLLFAIPFGYVGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IATSMSALLNATLLYRGLHLAGVYRVSRPTMVFFAKAVVSTALMVVVLYYFLPSQQIWLD HHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH WHLFERAKALIGLILAGAVSYLLGLLLLGIRPWSIKRGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9457888; 10952301 [H]