| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yaaA [C]
Identifier: 160874269
GI number: 160874269
Start: 1363580
End: 1364353
Strand: Direct
Name: yaaA [C]
Synonym: Sbal195_1149
Alternate gene names: 160874269
Gene position: 1363580-1364353 (Clockwise)
Preceding gene: 160874268
Following gene: 160874271
Centisome position: 25.5
GC content: 41.34
Gene sequence:
>774_bases ATGTTGATATTGGTTTCGCCGGCGAAGACCTTAGATTTTGAACAGCCGCCACTGACGCAGGTGTATTCACAGCCTGATTT CTTAACTCATAGTCAGGAGTTGATCCAAGTTTGTCGGCAATTAACTCCTTCAGATATCGCGACTTTGATGAAGGTGAGCG ATAAAATTGCGGGTTTAAATGCGGCGCGTTTCGGACAGTGGCAGCCAGACTTTAGTTTAGATAATGCTAAACAGGCCATT TTTGCCTTTAGAGGGGATGTGTACACAGGTTTTGATGCTGACACCTTATCTGAGGATGAAATCGCCCAGACTCAGTCGCA GCTGCGTATTCTATCGGGTCTTTATGGTTTGCTAAGGCCGCTGGATTTAATCATGCCTTACCGTTTAGAAATGGGAACGG CGCTTTCGAATCCAAAAGGTAAAAATTTATATGAATTTTGGGGTGATACCTTAACGCAAGCGGTAAATGAAGCGCTTGCA GAAAGTGGTAGCGATATTATTGTCAATCTTGCTTCTAATGAGTATTTCAAAGCGATAAAGCCTAAAAAACTGCAAGGGCA ATTAATTTCACCCGTATTTAAAGATTGTAAAAATGGTCAATATAAAGTGATCAGTTTTTTTGCTAAGCGTGCTAGGGGCA TGATGGCGAGATATATCATCACCAATAAAGTGAATACGTTAGCTGAGTTAAGAGCATTTAATCTCGCGGGTTATTACTAT AGTGAAGAGCAAAGTTCACCGACAAATCCAACATTTTTACGTGCAGAGCAATAG
Upstream 100 bases:
>100_bases CTGATTGTCGTAATCGAAAAGACCACGCCGTTAAAGCGTGGTTTTTTTATGTTCGTTCAGTATCATAGACATGTCTTTTT GTTTCTGTTGGGAGTTTTTG
Downstream 100 bases:
>100_bases CGAAATATCGATAAGATGTTAATTGATAGAGAACAGCTTATGCTGTTCTCTCTATTATTTTGTCGATTATCTATTTTTCA GACTGAATGACTAAAGGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLILVSPAKTLDFEQPPLTQVYSQPDFLTHSQELIQVCRQLTPSDIATLMKVSDKIAGLNAARFGQWQPDFSLDNAKQAI FAFRGDVYTGFDADTLSEDEIAQTQSQLRILSGLYGLLRPLDLIMPYRLEMGTALSNPKGKNLYEFWGDTLTQAVNEALA ESGSDIIVNLASNEYFKAIKPKKLQGQLISPVFKDCKNGQYKVISFFAKRARGMMARYIITNKVNTLAELRAFNLAGYYY SEEQSSPTNPTFLRAEQ
Sequences:
>Translated_257_residues MLILVSPAKTLDFEQPPLTQVYSQPDFLTHSQELIQVCRQLTPSDIATLMKVSDKIAGLNAARFGQWQPDFSLDNAKQAI FAFRGDVYTGFDADTLSEDEIAQTQSQLRILSGLYGLLRPLDLIMPYRLEMGTALSNPKGKNLYEFWGDTLTQAVNEALA ESGSDIIVNLASNEYFKAIKPKKLQGQLISPVFKDCKNGQYKVISFFAKRARGMMARYIITNKVNTLAELRAFNLAGYYY SEEQSSPTNPTFLRAEQ >Mature_257_residues MLILVSPAKTLDFEQPPLTQVYSQPDFLTHSQELIQVCRQLTPSDIATLMKVSDKIAGLNAARFGQWQPDFSLDNAKQAI FAFRGDVYTGFDADTLSEDEIAQTQSQLRILSGLYGLLRPLDLIMPYRLEMGTALSNPKGKNLYEFWGDTLTQAVNEALA ESGSDIIVNLASNEYFKAIKPKKLQGQLISPVFKDCKNGQYKVISFFAKRARGMMARYIITNKVNTLAELRAFNLAGYYY SEEQSSPTNPTFLRAEQ
Specific function: Unknown
COG id: COG3022
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0246 family [H]
Homologues:
Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=57.1984435797665, Blast_Score=322, Evalue=1e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005583 [H]
Pfam domain/function: PF03883 DUF328 [H]
EC number: NA
Molecular weight: Translated: 28846; Mature: 28846
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILVSPAKTLDFEQPPLTQVYSQPDFLTHSQELIQVCRQLTPSDIATLMKVSDKIAGLN CEEEECCHHHCCCCCCCHHHHHCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC AARFGQWQPDFSLDNAKQAIFAFRGDVYTGFDADTLSEDEIAQTQSQLRILSGLYGLLRP HHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDLIMPYRLEMGTALSNPKGKNLYEFWGDTLTQAVNEALAESGSDIIVNLASNEYFKAIK HHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCC PKKLQGQLISPVFKDCKNGQYKVISFFAKRARGMMARYIITNKVNTLAELRAFNLAGYYY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE SEEQSSPTNPTFLRAEQ CCCCCCCCCCCEEEECC >Mature Secondary Structure MLILVSPAKTLDFEQPPLTQVYSQPDFLTHSQELIQVCRQLTPSDIATLMKVSDKIAGLN CEEEECCHHHCCCCCCCHHHHHCCCCHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC AARFGQWQPDFSLDNAKQAIFAFRGDVYTGFDADTLSEDEIAQTQSQLRILSGLYGLLRP HHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDLIMPYRLEMGTALSNPKGKNLYEFWGDTLTQAVNEALAESGSDIIVNLASNEYFKAIK HHHHHCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCC PKKLQGQLISPVFKDCKNGQYKVISFFAKRARGMMARYIITNKVNTLAELRAFNLAGYYY CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE SEEQSSPTNPTFLRAEQ CCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA