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The map label for this gene is yqaA [H]

Identifier: 160874250

GI number: 160874250

Start: 1338166

End: 1338591

Strand: Direct

Name: yqaA [H]

Synonym: Sbal195_1130

Alternate gene names: 160874250

Gene position: 1338166-1338591 (Clockwise)

Preceding gene: 160874247

Following gene: 160874251

Centisome position: 25.03

GC content: 50.94

Gene sequence:

>426_bases
ATGACTGAGTTAGGCATTATGTTCTCCGGCGCTTTTTTAGCGGCGACTTTGTTACCGGGGGGATCTGAAGTCTTACTCGT
GGCGCTATTAAACAAAACTCCAGAGGCTTGGGTTGCGCTGGTCGTGGTGGCAAGTATTGGCAACACGTTGGGCGCGATGA
CCAGTTTCTATTTAGGCCGCTTAGGTCGCCTAGCACAATCACCAGAAGCGTTAGCGACAGGTAAACACGCAAAGGGGCTC
GCCATGATTGAACGCTACGGCGTGTGGGCGCTGTTACTCTCATGGGCACCGGTTATCGGCGATGTTCTCTGTTTATTGGC
GGGCTGGGTGAGGTTGCCGCTAATTTCTTCTTTGCTGATGATTTTAATCGGTAAAACAATTCGTTACTTAATTGTTGCCG
CTGCCGTGCTGCAATGGATGGCATGA

Upstream 100 bases:

>100_bases
GAGTTTGTTGTAAAAAGATTAAGTGAAACATTCAATTAACCCATAACAAACCTTATTGCATTGAATACAAAAAGAGAGAT
TTATCATTGAGTAAGCCATT

Downstream 100 bases:

>100_bases
TGGCGTTAGGATGCATTTAATGGTCAAGGGCGGGGAGTGTTTTTCCGTTTAGACTGAATTTACTGTATAGATAGGAACTT
AGTGTCAATTTTGCGAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTELGIMFSGAFLAATLLPGGSEVLLVALLNKTPEAWVALVVVASIGNTLGAMTSFYLGRLGRLAQSPEALATGKHAKGL
AMIERYGVWALLLSWAPVIGDVLCLLAGWVRLPLISSLLMILIGKTIRYLIVAAAVLQWMA

Sequences:

>Translated_141_residues
MTELGIMFSGAFLAATLLPGGSEVLLVALLNKTPEAWVALVVVASIGNTLGAMTSFYLGRLGRLAQSPEALATGKHAKGL
AMIERYGVWALLLSWAPVIGDVLCLLAGWVRLPLISSLLMILIGKTIRYLIVAAAVLQWMA
>Mature_140_residues
TELGIMFSGAFLAATLLPGGSEVLLVALLNKTPEAWVALVVVASIGNTLGAMTSFYLGRLGRLAQSPEALATGKHAKGLA
MIERYGVWALLLSWAPVIGDVLCLLAGWVRLPLISSLLMILIGKTIRYLIVAAAVLQWMA

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=133, Percent_Identity=45.8646616541353, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 14933; Mature: 14802

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELGIMFSGAFLAATLLPGGSEVLLVALLNKTPEAWVALVVVASIGNTLGAMTSFYLGR
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRLAQSPEALATGKHAKGLAMIERYGVWALLLSWAPVIGDVLCLLAGWVRLPLISSLLM
HHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGKTIRYLIVAAAVLQWMA
HHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TELGIMFSGAFLAATLLPGGSEVLLVALLNKTPEAWVALVVVASIGNTLGAMTSFYLGR
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGRLAQSPEALATGKHAKGLAMIERYGVWALLLSWAPVIGDVLCLLAGWVRLPLISSLLM
HHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIGKTIRYLIVAAAVLQWMA
HHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]