| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is oadA [H]
Identifier: 160874246
GI number: 160874246
Start: 1333075
End: 1334898
Strand: Direct
Name: oadA [H]
Synonym: Sbal195_1126
Alternate gene names: 160874246
Gene position: 1333075-1334898 (Clockwise)
Preceding gene: 160874245
Following gene: 160874247
Centisome position: 24.93
GC content: 49.95
Gene sequence:
>1824_bases ATGACTTTTGTATCTAATTCTACGACGGCAGTGGCTAAGCCATTATTTTTAACTGATGTCGTTTTGCGGGACGCGCATCA ATCCATTTTAGCGACGCGCTTACGCATTGATGACATGTTACCGATAGCGCCACTACTCGATAAGATCGGCTTCTGGTCAC TGGAATCTTGGGGCGGTGCGACGTTTGATGCTTGTATTCGTTATCTTGGTGAAGATCCTTGGGATCGAATTCGTGAGCTG AAAAAGGCCATGCCGAATACGCCGCAGCAAATGTTACTGCGTGGCCAAAACCTCTTAGGTTATCGCCATTATGCCGATGA TTTAGTCACGCGTTTTGTTGAGCGCGCCCATACCAATGGCGTTGATGTATTTCGGATTTTCGATGCGATGAACGATGTGC GCAACCTCGAGACTGCGGTGAAAGCAGTGCGCCAAGTTGGCGGCCATGCGCAGGGGACGATTTCGTATACCACGAGTCCA GTGCATACCATAGAGACGTGGGTTGATATGGCAAAACGTCTCGAAGATATGGGATGCGATTCTTTGTGCATCAAAGATAT GGCGGGCTTACTTAAGCCGATGGAAGCGTTTGAGCTTATTAGCCGACTCAAATCTCAGACGCAACTCGTGTTATCTATGC ATTGTCATGCGACGACAGGGTTGAGTACGGCCACTTATCAGAAAGCCATTGAAGCGGGCATCGATGTGCTCGATACGGCA ATTTCGTCGATGAGTCAAACCTATGGACATACTGCAACTGAAACTGTTATCGCTATGGTGGAAGATACTGAGCGCGCTAC TGGTTACGATATGGTGTTGCTTGAAGAGATTGCCGCTTATTTTCGTGAAGTGCGCAAGAAGTACGCTAAGTTTGAAGGAG CGCTGAAAGGCATCGATTCGCGGATCTTACGTGCCCAAGTGCCTGGTGGCATGCTGACCAATATGGAGAGCCAATTAAAG GAGCAAGGCGCGGCCGATAAGATGGACTTGGTATTGGAAGAAATCCCCCGCGTTCGTGCTGATTTAGGTTTCTTGCCGTT AGTGACGCCCACATCGCAAATTGTCGGCTCGCAGGCGGTCATTAATGTGTTAATGGGTGAGCGTTATAAGTCACTGACGA AAGAGACTGAAGGCGTGCTTAAGGGCGAATATGGCGCGACGCCTGCGCCAGTAGATGCCGCATTGCAAGCCAGAGTGTTG CAAGGGGCTGAAGCTATTACATGTCGCCCTGCGGATTTATTAACGCCAGAGCTGGCTAAGTTACGGCTTGAGTTAGCTGA TAAAGCACAGGAACAAGGCATTCGCCTATCTTCAGAGCATGACGATGATGTGCTGACCTATGCACTCTTCCCACAAATAG GATTGCAGTTCTTAAAGAATCGTGACGATCCAAGCGCCTTTGAGCCTAAACCTGAATTGACTTCAGCACTTGCTACTAAT GCTGCGGATCGTGGCCCTGAAACCTACACGGTAACAGTCGAAGGGAAAGAGTACGTAGTTGAAGTCGCCACAGGCGGGGA GATCTCGCAAATCCAGCCACAGGGCCAAAGTGTTCATGCCGTGCAAACTGCTACGGCGAGCACTACGCCAACTGCGTGCC ATGGAGAGATCAGGCTTGAAATGAGCGCGCCGCTGTCGGGCAACATCTTCAAAGTTCATGTTTCTCCAGGCGATAGAGTG TGTGAAGGCGATGTCGTGATCATCCTTGAGGCGATGAAGATGGAAACTGAAATTCGTGCTCAGGGCGATGGCATTATCGC TAAGCTCTGGGTGAAAGAAGGCGACTCAGTGTCTGTGGGTTCTCAATTACTGGCCTTGGCGTAG
Upstream 100 bases:
>100_bases TAGCGCAATCTGATGCTAAGCCTTTAGACCCTAATGTGGTCGCTGCGATTTCATTGGCGGTAAAGCAGTATCGTTCACAG ATTAAGTAATGGGGAGCAGT
Downstream 100 bases:
>100_bases GAGTCATTATGGAAGGTTTAATGGCTTTTTGGGCCGAGACTGGTATTGCCCATTTTACTGGCGGGCAAGTGTTGATGATG GCAGTGGGCGCTTTGCTCTT
Product: oxaloacetate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MTFVSNSTTAVAKPLFLTDVVLRDAHQSILATRLRIDDMLPIAPLLDKIGFWSLESWGGATFDACIRYLGEDPWDRIREL KKAMPNTPQQMLLRGQNLLGYRHYADDLVTRFVERAHTNGVDVFRIFDAMNDVRNLETAVKAVRQVGGHAQGTISYTTSP VHTIETWVDMAKRLEDMGCDSLCIKDMAGLLKPMEAFELISRLKSQTQLVLSMHCHATTGLSTATYQKAIEAGIDVLDTA ISSMSQTYGHTATETVIAMVEDTERATGYDMVLLEEIAAYFREVRKKYAKFEGALKGIDSRILRAQVPGGMLTNMESQLK EQGAADKMDLVLEEIPRVRADLGFLPLVTPTSQIVGSQAVINVLMGERYKSLTKETEGVLKGEYGATPAPVDAALQARVL QGAEAITCRPADLLTPELAKLRLELADKAQEQGIRLSSEHDDDVLTYALFPQIGLQFLKNRDDPSAFEPKPELTSALATN AADRGPETYTVTVEGKEYVVEVATGGEISQIQPQGQSVHAVQTATASTTPTACHGEIRLEMSAPLSGNIFKVHVSPGDRV CEGDVVIILEAMKMETEIRAQGDGIIAKLWVKEGDSVSVGSQLLALA
Sequences:
>Translated_607_residues MTFVSNSTTAVAKPLFLTDVVLRDAHQSILATRLRIDDMLPIAPLLDKIGFWSLESWGGATFDACIRYLGEDPWDRIREL KKAMPNTPQQMLLRGQNLLGYRHYADDLVTRFVERAHTNGVDVFRIFDAMNDVRNLETAVKAVRQVGGHAQGTISYTTSP VHTIETWVDMAKRLEDMGCDSLCIKDMAGLLKPMEAFELISRLKSQTQLVLSMHCHATTGLSTATYQKAIEAGIDVLDTA ISSMSQTYGHTATETVIAMVEDTERATGYDMVLLEEIAAYFREVRKKYAKFEGALKGIDSRILRAQVPGGMLTNMESQLK EQGAADKMDLVLEEIPRVRADLGFLPLVTPTSQIVGSQAVINVLMGERYKSLTKETEGVLKGEYGATPAPVDAALQARVL QGAEAITCRPADLLTPELAKLRLELADKAQEQGIRLSSEHDDDVLTYALFPQIGLQFLKNRDDPSAFEPKPELTSALATN AADRGPETYTVTVEGKEYVVEVATGGEISQIQPQGQSVHAVQTATASTTPTACHGEIRLEMSAPLSGNIFKVHVSPGDRV CEGDVVIILEAMKMETEIRAQGDGIIAKLWVKEGDSVSVGSQLLALA >Mature_606_residues TFVSNSTTAVAKPLFLTDVVLRDAHQSILATRLRIDDMLPIAPLLDKIGFWSLESWGGATFDACIRYLGEDPWDRIRELK KAMPNTPQQMLLRGQNLLGYRHYADDLVTRFVERAHTNGVDVFRIFDAMNDVRNLETAVKAVRQVGGHAQGTISYTTSPV HTIETWVDMAKRLEDMGCDSLCIKDMAGLLKPMEAFELISRLKSQTQLVLSMHCHATTGLSTATYQKAIEAGIDVLDTAI SSMSQTYGHTATETVIAMVEDTERATGYDMVLLEEIAAYFREVRKKYAKFEGALKGIDSRILRAQVPGGMLTNMESQLKE QGAADKMDLVLEEIPRVRADLGFLPLVTPTSQIVGSQAVINVLMGERYKSLTKETEGVLKGEYGATPAPVDAALQARVLQ GAEAITCRPADLLTPELAKLRLELADKAQEQGIRLSSEHDDDVLTYALFPQIGLQFLKNRDDPSAFEPKPELTSALATNA ADRGPETYTVTVEGKEYVVEVATGGEISQIQPQGQSVHAVQTATASTTPTACHGEIRLEMSAPLSGNIFKVHVSPGDRVC EGDVVIILEAMKMETEIRAQGDGIIAKLWVKEGDSVSVGSQLLALA
Specific function: Lyase and sodium transporter [H]
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=628, Percent_Identity=31.2101910828025, Blast_Score=274, Evalue=2e-73, Organism=Homo sapiens, GI106049295, Length=628, Percent_Identity=31.2101910828025, Blast_Score=274, Evalue=2e-73, Organism=Homo sapiens, GI106049292, Length=628, Percent_Identity=31.2101910828025, Blast_Score=274, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17562816, Length=617, Percent_Identity=31.6045380875203, Blast_Score=294, Evalue=8e-80, Organism=Saccharomyces cerevisiae, GI6319695, Length=636, Percent_Identity=32.2327044025157, Blast_Score=301, Evalue=3e-82, Organism=Saccharomyces cerevisiae, GI6321376, Length=629, Percent_Identity=32.2734499205087, Blast_Score=298, Evalue=2e-81, Organism=Drosophila melanogaster, GI281363050, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652224, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652222, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652220, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652218, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652212, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652210, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652214, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI19921944, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78, Organism=Drosophila melanogaster, GI24652216, Length=621, Percent_Identity=32.6892109500805, Blast_Score=291, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR005776 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 66356; Mature: 66225
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50991 PYR_CT ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVSNSTTAVAKPLFLTDVVLRDAHQSILATRLRIDDMLPIAPLLDKIGFWSLESWGGA CCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC TFDACIRYLGEDPWDRIRELKKAMPNTPQQMLLRGQNLLGYRHYADDLVTRFVERAHTNG CHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VDVFRIFDAMNDVRNLETAVKAVRQVGGHAQGTISYTTSPVHTIETWVDMAKRLEDMGCD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC SLCIKDMAGLLKPMEAFELISRLKSQTQLVLSMHCHATTGLSTATYQKAIEAGIDVLDTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHH ISSMSQTYGHTATETVIAMVEDTERATGYDMVLLEEIAAYFREVRKKYAKFEGALKGIDS HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILRAQVPGGMLTNMESQLKEQGAADKMDLVLEEIPRVRADLGFLPLVTPTSQIVGSQAV HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH INVLMGERYKSLTKETEGVLKGEYGATPAPVDAALQARVLQGAEAITCRPADLLTPELAK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHCCHHHHH LRLELADKAQEQGIRLSSEHDDDVLTYALFPQIGLQFLKNRDDPSAFEPKPELTSALATN HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC AADRGPETYTVTVEGKEYVVEVATGGEISQIQPQGQSVHAVQTATASTTPTACHGEIRLE CCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE MSAPLSGNIFKVHVSPGDRVCEGDVVIILEAMKMETEIRAQGDGIIAKLWVKEGDSVSVG EECCCCCCEEEEEECCCCCEECCCEEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCHH SQLLALA HHHHHCC >Mature Secondary Structure TFVSNSTTAVAKPLFLTDVVLRDAHQSILATRLRIDDMLPIAPLLDKIGFWSLESWGGA CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC TFDACIRYLGEDPWDRIRELKKAMPNTPQQMLLRGQNLLGYRHYADDLVTRFVERAHTNG CHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VDVFRIFDAMNDVRNLETAVKAVRQVGGHAQGTISYTTSPVHTIETWVDMAKRLEDMGCD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCC SLCIKDMAGLLKPMEAFELISRLKSQTQLVLSMHCHATTGLSTATYQKAIEAGIDVLDTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHH ISSMSQTYGHTATETVIAMVEDTERATGYDMVLLEEIAAYFREVRKKYAKFEGALKGIDS HHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILRAQVPGGMLTNMESQLKEQGAADKMDLVLEEIPRVRADLGFLPLVTPTSQIVGSQAV HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH INVLMGERYKSLTKETEGVLKGEYGATPAPVDAALQARVLQGAEAITCRPADLLTPELAK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHCCHHHHH LRLELADKAQEQGIRLSSEHDDDVLTYALFPQIGLQFLKNRDDPSAFEPKPELTSALATN HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC AADRGPETYTVTVEGKEYVVEVATGGEISQIQPQGQSVHAVQTATASTTPTACHGEIRLE CCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE MSAPLSGNIFKVHVSPGDRVCEGDVVIILEAMKMETEIRAQGDGIIAKLWVKEGDSVSVG EECCCCCCEEEEEECCCCCEECCCEEEEEEHHHHHHHHHHCCCCEEEEEEECCCCCCCHH SQLLALA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2454915 [H]