Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874245

Identifier: 160874245

GI number: 160874245

Start: 1332797

End: 1333063

Strand: Direct

Name: 160874245

Synonym: Sbal195_1125

Alternate gene names: NA

Gene position: 1332797-1333063 (Clockwise)

Preceding gene: 160874244

Following gene: 160874246

Centisome position: 24.92

GC content: 43.45

Gene sequence:

>267_bases
ATGGAGGATGTAACGCAATCTTTATTGGATGCCGTTGGCATTATGTTTTTGGGGATGGGCTTAGTGTATTTATTTTTAAG
TGTACTAATCCTTGGGATCCATTTGGTTGCGCGCTGGTGTGCAGTCGATGCTGCCTCTGCACGTTTTGCTAAAAATCATG
CTAAAAGTCAGCAGAGGATAGCGCAATCTGATGCTAAGCCTTTAGACCCTAATGTGGTCGCTGCGATTTCATTGGCGGTA
AAGCAGTATCGTTCACAGATTAAGTAA

Upstream 100 bases:

>100_bases
ACCGCTCAACCGATTGAATGTTGAACTTGTGATGCGATAGCGATGGTTTGGGGCAATCGTACTGTGGATAGGGATTGAGA
GAGTAAGGGGTAGGGGAGCG

Downstream 100 bases:

>100_bases
TGGGGAGCAGTATGACTTTTGTATCTAATTCTACGACGGCAGTGGCTAAGCCATTATTTTTAACTGATGTCGTTTTGCGG
GACGCGCATCAATCCATTTT

Product: sodium pump decarboxylase subunit gamma

Products: NA

Alternate protein names: Sodium Pump Decarboxylase Gamma Subunit

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MEDVTQSLLDAVGIMFLGMGLVYLFLSVLILGIHLVARWCAVDAASARFAKNHAKSQQRIAQSDAKPLDPNVVAAISLAV
KQYRSQIK

Sequences:

>Translated_88_residues
MEDVTQSLLDAVGIMFLGMGLVYLFLSVLILGIHLVARWCAVDAASARFAKNHAKSQQRIAQSDAKPLDPNVVAAISLAV
KQYRSQIK
>Mature_88_residues
MEDVTQSLLDAVGIMFLGMGLVYLFLSVLILGIHLVARWCAVDAASARFAKNHAKSQQRIAQSDAKPLDPNVVAAISLAV
KQYRSQIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9583; Mature: 9583

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDVTQSLLDAVGIMFLGMGLVYLFLSVLILGIHLVARWCAVDAASARFAKNHAKSQQRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSDAKPLDPNVVAAISLAVKQYRSQIK
HHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDVTQSLLDAVGIMFLGMGLVYLFLSVLILGIHLVARWCAVDAASARFAKNHAKSQQRI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQSDAKPLDPNVVAAISLAVKQYRSQIK
HHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA