| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is csgG [H]
Identifier: 160874158
GI number: 160874158
Start: 1235061
End: 1235867
Strand: Direct
Name: csgG [H]
Synonym: Sbal195_1038
Alternate gene names: 160874158
Gene position: 1235061-1235867 (Clockwise)
Preceding gene: 160874157
Following gene: 160874161
Centisome position: 23.1
GC content: 49.32
Gene sequence:
>807_bases ATGGCCCGTTTAGTCTTTTGGGGTCTATTGCTGTTAAGCATGTCGGCCTGTAGCTTGATCCCAAAACCCGATTTAAATAT CACGCCTGCCGAGGTTAACCCCTTGAGTGAAGTGATGCGTGGGCTACAAACTCAACCTGGCCCTAAGTTTCCCATCCCAG TAGCCGTGTATTCCTTTCGCGATCAAACTGGCCAATATAAACCACAGGCGAACGTGAGTTCGTTTTCGACTGCTGTGACT CAGGGCGCAACTTCGATGTTGATGCAGACCTTGCTCGATTCTAAATGGTTTACCCCAGTGGAACGTGAAGGGCTACAAAA CCTGCTGACTGAGCGCAAAATTAGTAATAAACAGAGCGGTACTAAGGGTGATGATGTGCCCGTATTATCCACCGCCAGAT TGTTACTCGAAGGTGGCGTCATTAGCTATGAGACTAACACCAGCACAGGCGGTAGCGGTGTCGAATACTACGGCATTGGC GCTTCGGAAATGTACCGTGAAGATCAGGTGACCATTTATCTTCGCGCCGTCGATGTGCACACAGGTAAAGTGATGATGTC GGTCTCGACCAGCAAACGTGTTTTATCCCAAGAAATGCGCGCGGGTTTATTCCGTTACACTAGTTTAAATCGCCTCGCCG AGGCTGAAATCGGCTTTACTACCAATGAGCCAGTGCAGTTTTGCGTGTTGCAAGCCATTGAATTAGCGGTCGCTGAGCTG ATTGATAAGGGCATTAAGCAAGGCTACTGGAGTCCAACTCAAGTCACCCAGCCAGTCGAGAAAGCGCAGGAATTGAGTCA GAGTTAG
Upstream 100 bases:
>100_bases AAGTGGCATCGACAGGAAATGGCGTGATGTTGACCATCACGAATACTGAAACCGGTGAAATCACTGTGATTGAAATGCCG ACGTTTGGAGGTATCAACTA
Downstream 100 bases:
>100_bases ACGTTAGACGTCGGAGTTAGATATCGCTGAAAGCAGGCATCTGCTTTAACTCTTAGTCACTATATGTGTGAATACGTAAA AGAAAACCGAGCCAGTTAAA
Product: curli production assembly/transport protein CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MARLVFWGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIG ASEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSPTQVTQPVEKAQELSQS
Sequences:
>Translated_268_residues MARLVFWGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIG ASEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSPTQVTQPVEKAQELSQS >Mature_267_residues ARLVFWGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVTQ GATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSGTKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGA SEMYREDQVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAELI DKGIKQGYWSPTQVTQPVEKAQELSQS
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=256, Percent_Identity=44.140625, Blast_Score=211, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 29427; Mature: 29296
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLVFWGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGASEMYREDQVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEEEEE TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPVEKAQELSQS HHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLVFWGLLLLSMSACSLIPKPDLNITPAEVNPLSEVMRGLQTQPGPKFPIPVAVYSFR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLLDSKWFTPVEREGLQNLLTERKISNKQSG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDVPVLSTARLLLEGGVISYETNTSTGGSGVEYYGIGASEMYREDQVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHCCCCEEEEEEEEEEE TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEIGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSPTQVTQPVEKAQELSQS HHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA