| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874157
Identifier: 160874157
GI number: 160874157
Start: 1234666
End: 1235061
Strand: Direct
Name: 160874157
Synonym: Sbal195_1037
Alternate gene names: NA
Gene position: 1234666-1235061 (Clockwise)
Preceding gene: 160874156
Following gene: 160874158
Centisome position: 23.09
GC content: 45.96
Gene sequence:
>396_bases ATGACATACAGGACGTTACTTGCCCTTGTCACGCTATGTGTGGCAAGCAGTGGCCAAGCCACTGAATTGATTTACACGCC AGTGAATCCCAGTTTTGGCGGCAATCCACAAAATGGGGCTTTTCTATTAAATAAAGCCCAAGCGCAGAATGACAATAAAT CCAACTCGACCGAGAAGGACTTTGTTACCCGTTTTAAAGAATCCCTAGAGCGTAACATCATCAACTCGATCACCCGCGGT GTCGCTGATGGCGAAATCACCGATGGCGTTTATGATACCGGTGATTTTCGTATTGAAGTGGCATCGACAGGAAATGGCGT GATGTTGACCATCACGAATACTGAAACCGGTGAAATCACTGTGATTGAAATGCCGACGTTTGGAGGTATCAACTAA
Upstream 100 bases:
>100_bases CAGGCGATTTTGATCACGATTGATTATTTAGCGCAAGTCAGAGCCAATGCAATAACAGGTGACTTTTCAGGAACATCGGA CGACTTTTAGGATAATAATA
Downstream 100 bases:
>100_bases TGGCCCGTTTAGTCTTTTGGGGTCTATTGCTGTTAAGCATGTCGGCCTGTAGCTTGATCCCAAAACCCGATTTAAATATC ACGCCTGCCGAGGTTAACCC
Product: curli production assembly/transport protein CsgF
Products: NA
Alternate protein names: Curli Production Assembly/Transport Component; Curli Fiber Protein CsgF; Assembly/Transport Component In Curli Production CsgF
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTYRTLLALVTLCVASSGQATELIYTPVNPSFGGNPQNGAFLLNKAQAQNDNKSNSTEKDFVTRFKESLERNIINSITRG VADGEITDGVYDTGDFRIEVASTGNGVMLTITNTETGEITVIEMPTFGGIN
Sequences:
>Translated_131_residues MTYRTLLALVTLCVASSGQATELIYTPVNPSFGGNPQNGAFLLNKAQAQNDNKSNSTEKDFVTRFKESLERNIINSITRG VADGEITDGVYDTGDFRIEVASTGNGVMLTITNTETGEITVIEMPTFGGIN >Mature_130_residues TYRTLLALVTLCVASSGQATELIYTPVNPSFGGNPQNGAFLLNKAQAQNDNKSNSTEKDFVTRFKESLERNIINSITRGV ADGEITDGVYDTGDFRIEVASTGNGVMLTITNTETGEITVIEMPTFGGIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14072; Mature: 13941
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRTLLALVTLCVASSGQATELIYTPVNPSFGGNPQNGAFLLNKAQAQNDNKSNSTEKD CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH FVTRFKESLERNIINSITRGVADGEITDGVYDTGDFRIEVASTGNGVMLTITNTETGEIT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCEE VIEMPTFGGIN EEEECCCCCCC >Mature Secondary Structure TYRTLLALVTLCVASSGQATELIYTPVNPSFGGNPQNGAFLLNKAQAQNDNKSNSTEKD CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH FVTRFKESLERNIINSITRGVADGEITDGVYDTGDFRIEVASTGNGVMLTITNTETGEIT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCEEEEEECCCCCCEE VIEMPTFGGIN EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA