| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yghX [H]
Identifier: 160874120
GI number: 160874120
Start: 1189186
End: 1190166
Strand: Direct
Name: yghX [H]
Synonym: Sbal195_1000
Alternate gene names: 160874120
Gene position: 1189186-1190166 (Clockwise)
Preceding gene: 160874113
Following gene: 160874124
Centisome position: 22.24
GC content: 52.29
Gene sequence:
>981_bases ATGACACAGCAAGACAAGCAAGCCGTAGCAGACACAAGCCAGATGAGTGTTCAGAAAGTACAACCGATACCGCAGGAAGC CTTTGACTGGTATGACGAATATGCCCACGGCATTATCGACCGCCGTGAGTTTATGGGGCGGCTTGCAGGACTTGTGGCGC TAGGGTTTACCCTGACAACGCTCACGGGCGCACTCATGCCGAACTATGCCCTTGCCGAACAAGTGTCGTTTAACGACCCG AGTATTCAAGCGAGCTATGTTAAATTTCCCTCGCCCAATGGCTACGGTGAAGGGCGCGGCTATTTAGTAATACCCAATGA GTTATTACTCGCGGGCAGTGCCGCTGGTGAGCCCAAGACTTTAGATCCCAGTAAAAAAGCCGCAGTGGTATTAGTGGTGC ACGAGAATCGTGGCCTAAATCCCTATATCGAAGATGTGGCTCGCCGATTAGCGGCGCAGGGGTATATCGCCTTCGCCCCC GATGCACTTTATTCTCTTGGTGGTTATCCGGGCAATGATGATGCGGGCCGAGCCATGCAAAGCAGTTTAGACAGAGCCAA AATTGAACAAGACTTTATTGCCGCCGCGCAGTTTTTAAAATCCCATCCTCAGAGCAATGGCAAACTCGGTGCCGTAGGTT TTTGCTTTGGCGGCTATATTGTCAATATGCTGGCCGCGACGATTCCCGATGAACTCAATGCTGGCGTACCTTTCTATGGC ACACCCGCGGCTGCAGAGCTGCGTAGCCGCGTGAAAGGGCCGTTAATGTTGCAGTTTGCTGGGCTCGATCAGCGTGTGAA CGACACTTGGGCCGAGTACGAAACCCAGTTGAAAACCAGTAAAGCCGATTATGTCGCCTATCTTTACCCGAATGTGAATC ACGGTTTCCATAACGACTCAACAGGACGATACGATAAAGCTACCGCCGAGCTCGCATGGGCGCGCAGCTTAGCCTTCTTC GATACTCGACTGCGTGGTTAG
Upstream 100 bases:
>100_bases TTGCCCTAAGTACGATTCTTCCTTTACTCTTGAGTTAAATCTTAACACCCACAAGCTAGGGAAGTGACCTGTGGTTAGCT TGTTCAACGGAGGAATAACG
Downstream 100 bases:
>100_bases TGAGAGTAAACGCCGTTGACTGACAGATTTTCGTGCTCTATATCAATCAAGCAAAAGCCGACGCTAGCGTCGGCTTTTAT TTTTAATTTCCCACATATCC
Product: dienelactone hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTQQDKQAVADTSQMSVQKVQPIPQEAFDWYDEYAHGIIDRREFMGRLAGLVALGFTLTTLTGALMPNYALAEQVSFNDP SIQASYVKFPSPNGYGEGRGYLVIPNELLLAGSAAGEPKTLDPSKKAAVVLVVHENRGLNPYIEDVARRLAAQGYIAFAP DALYSLGGYPGNDDAGRAMQSSLDRAKIEQDFIAAAQFLKSHPQSNGKLGAVGFCFGGYIVNMLAATIPDELNAGVPFYG TPAAAELRSRVKGPLMLQFAGLDQRVNDTWAEYETQLKTSKADYVAYLYPNVNHGFHNDSTGRYDKATAELAWARSLAFF DTRLRG
Sequences:
>Translated_326_residues MTQQDKQAVADTSQMSVQKVQPIPQEAFDWYDEYAHGIIDRREFMGRLAGLVALGFTLTTLTGALMPNYALAEQVSFNDP SIQASYVKFPSPNGYGEGRGYLVIPNELLLAGSAAGEPKTLDPSKKAAVVLVVHENRGLNPYIEDVARRLAAQGYIAFAP DALYSLGGYPGNDDAGRAMQSSLDRAKIEQDFIAAAQFLKSHPQSNGKLGAVGFCFGGYIVNMLAATIPDELNAGVPFYG TPAAAELRSRVKGPLMLQFAGLDQRVNDTWAEYETQLKTSKADYVAYLYPNVNHGFHNDSTGRYDKATAELAWARSLAFF DTRLRG >Mature_325_residues TQQDKQAVADTSQMSVQKVQPIPQEAFDWYDEYAHGIIDRREFMGRLAGLVALGFTLTTLTGALMPNYALAEQVSFNDPS IQASYVKFPSPNGYGEGRGYLVIPNELLLAGSAAGEPKTLDPSKKAAVVLVVHENRGLNPYIEDVARRLAAQGYIAFAPD ALYSLGGYPGNDDAGRAMQSSLDRAKIEQDFIAAAQFLKSHPQSNGKLGAVGFCFGGYIVNMLAATIPDELNAGVPFYGT PAAAELRSRVKGPLMLQFAGLDQRVNDTWAEYETQLKTSKADYVAYLYPNVNHGFHNDSTGRYDKATAELAWARSLAFFD TRLRG
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=207, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 35537; Mature: 35406
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQQDKQAVADTSQMSVQKVQPIPQEAFDWYDEYAHGIIDRREFMGRLAGLVALGFTLTT CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGALMPNYALAEQVSFNDPSIQASYVKFPSPNGYGEGRGYLVIPNELLLAGSAAGEPKT HHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCC LDPSKKAAVVLVVHENRGLNPYIEDVARRLAAQGYIAFAPDALYSLGGYPGNDDAGRAMQ CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCHHHHHHH SSLDRAKIEQDFIAAAQFLKSHPQSNGKLGAVGFCFGGYIVNMLAATIPDELNAGVPFYG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHCCCCCCCC TPAAAELRSRVKGPLMLQFAGLDQRVNDTWAEYETQLKTSKADYVAYLYPNVNHGFHNDS CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC TGRYDKATAELAWARSLAFFDTRLRG CCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQQDKQAVADTSQMSVQKVQPIPQEAFDWYDEYAHGIIDRREFMGRLAGLVALGFTLTT CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTGALMPNYALAEQVSFNDPSIQASYVKFPSPNGYGEGRGYLVIPNELLLAGSAAGEPKT HHHHHCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCC LDPSKKAAVVLVVHENRGLNPYIEDVARRLAAQGYIAFAPDALYSLGGYPGNDDAGRAMQ CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHHHHCCCCCCCCHHHHHHH SSLDRAKIEQDFIAAAQFLKSHPQSNGKLGAVGFCFGGYIVNMLAATIPDELNAGVPFYG HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCHHHCCCCCCCC TPAAAELRSRVKGPLMLQFAGLDQRVNDTWAEYETQLKTSKADYVAYLYPNVNHGFHNDS CCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC TGRYDKATAELAWARSLAFFDTRLRG CCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]