Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160874094

Identifier: 160874094

GI number: 160874094

Start: 1158450

End: 1158977

Strand: Direct

Name: 160874094

Synonym: Sbal195_0974

Alternate gene names: NA

Gene position: 1158450-1158977 (Clockwise)

Preceding gene: 160874093

Following gene: 160874098

Centisome position: 21.66

GC content: 48.11

Gene sequence:

>528_bases
ATGATGAGTAAACTCAGCTCCTTGTTCCGAGTCATGATGGCGCATCTACATGTGTGGGTTGTGCTATCAAGCAGTTTACT
CGTCTGTGCCAGCCCGTGGATTTTTATGGGCCGACGGATACCCGATAACGCCGGTTTTTGGGACTATTTGCATGTGTATT
TAGGTTTAGCGTGCGCAGTGCTGGGGATATTGTTCTTACTCAGCAATACCTTGCATGGTAAATGGCGCCAATACTTTGGT
TGGCTAGCTGGCGATTGGACGCAATTAAAACAGGATATGCTTGGACTCACAAAAGGCAAATTCCCCGTCGCAGGTGGTAA
AGGGCTGTTTAGTGCAATAGAAGGTATCGGTATGCTGTTGCTGGTGGCGACAGGGGTTACGGGCCTCGTTTGGTTTGTTG
TTCAAGGGACGCCAACGGCGCTGGCGTGGCGCGGTTATCATCAAATTTTTGCGCAGGCTTTTATCGGTTTCTTGATCGTA
CATTTAATCTTAGCGGCGAGTCATATTCTCGATTTCATTCGCCAATAA

Upstream 100 bases:

>100_bases
AGCCCACTTTATTCGCGCTCACTAAGCCGCCGCGAATGCATTTAATCTTCAAACTTCAATCATGCAAAGGGCAAAGGAAG
CATTAAGTAGGATGAAAAAT

Downstream 100 bases:

>100_bases
CAGATTGGAAAATAACACTAAATGACTGTGTTTATATAGACGATTGAATTAAGTTCTTATATTGCAAGCGTGTTTCGAAT
GCGAATAAAAATGGCCTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMSKLSSLFRVMMAHLHVWVVLSSSLLVCASPWIFMGRRIPDNAGFWDYLHVYLGLACAVLGILFLLSNTLHGKWRQYFG
WLAGDWTQLKQDMLGLTKGKFPVAGGKGLFSAIEGIGMLLLVATGVTGLVWFVVQGTPTALAWRGYHQIFAQAFIGFLIV
HLILAASHILDFIRQ

Sequences:

>Translated_175_residues
MMSKLSSLFRVMMAHLHVWVVLSSSLLVCASPWIFMGRRIPDNAGFWDYLHVYLGLACAVLGILFLLSNTLHGKWRQYFG
WLAGDWTQLKQDMLGLTKGKFPVAGGKGLFSAIEGIGMLLLVATGVTGLVWFVVQGTPTALAWRGYHQIFAQAFIGFLIV
HLILAASHILDFIRQ
>Mature_175_residues
MMSKLSSLFRVMMAHLHVWVVLSSSLLVCASPWIFMGRRIPDNAGFWDYLHVYLGLACAVLGILFLLSNTLHGKWRQYFG
WLAGDWTQLKQDMLGLTKGKFPVAGGKGLFSAIEGIGMLLLVATGVTGLVWFVVQGTPTALAWRGYHQIFAQAFIGFLIV
HLILAASHILDFIRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19466; Mature: 19466

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKLSSLFRVMMAHLHVWVVLSSSLLVCASPWIFMGRRIPDNAGFWDYLHVYLGLACAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LGILFLLSNTLHGKWRQYFGWLAGDWTQLKQDMLGLTKGKFPVAGGKGLFSAIEGIGMLL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LVATGVTGLVWFVVQGTPTALAWRGYHQIFAQAFIGFLIVHLILAASHILDFIRQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMSKLSSLFRVMMAHLHVWVVLSSSLLVCASPWIFMGRRIPDNAGFWDYLHVYLGLACAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LGILFLLSNTLHGKWRQYFGWLAGDWTQLKQDMLGLTKGKFPVAGGKGLFSAIEGIGMLL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
LVATGVTGLVWFVVQGTPTALAWRGYHQIFAQAFIGFLIVHLILAASHILDFIRQ
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA