| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874077
Identifier: 160874077
GI number: 160874077
Start: 1134323
End: 1135039
Strand: Direct
Name: 160874077
Synonym: Sbal195_0957
Alternate gene names: NA
Gene position: 1134323-1135039 (Clockwise)
Preceding gene: 160874076
Following gene: 160874078
Centisome position: 21.21
GC content: 39.33
Gene sequence:
>717_bases ATGATGTTTGAGTTTAATTTTGAGCGAGATATGGCTTTATTACGTGAAGAATATACCAGAGACGCAAAAATCAACATTCA ACAAGTTTGGCAGAATGATACTGCTGCAATAATTGCCAAAACACTCGCGAGTGAAGTGATGTTTGATAATGCAATGTTTG TTGAAAATAAGCCGATGAGAGTTTCAGATCAACAAATACGCCAATTGCCTGTCTCCACTCAAAAGGATTTACAGCAAAAA ATATTACAGAATGCTTCAAATGGTATTGGGTTTTTATATGGTAGTCATCTAGTCGGCGGCCTTGACGGAAAAGCATCGCC TGAGTTACTTACTTCGCTACATCGTTTTATTAACCGCCCTGAAATGTTTAACTTTATCCAAGCGATTACAGGTATTGAAG GTATTTGCTATGCCTCACTACAGGCCAGTCGCTATATACAGGGAAATTTCTTAACGAGACATAATGATGTAGTGGAAAGC GAAGGACGTAAAGTCGCTTTTGTTTTTGGTTTTACACCAGAGTGGCATCCTGATTGGGGAGGTTTACTGCAATTTTTTAC ACCTCAAGGAGTTCTTACTGACACTTGGGTTCCCACTTTTAATAATTTGGCATTATTTGACGTGCACCATCCACATTCAG TTTCTTATGTTGCGCCTTTTGCGAGGCACTCAAGATTTTCAGTTACCGGATGGTTTCGTACTATAGCGCCTCAATAA
Upstream 100 bases:
>100_bases CGGGATGAAAATGCGATTGTGATTTTGTTGTTAAATTGTAATGATGGCATATTTGATTCGTAGCTTGAAAAGTAGAGTGT TTGAATAGTTCAAGGAATAA
Downstream 100 bases:
>100_bases GGTTAGTGAAGATTAGATTTTGATACTGTCGTAATTAGCATCAGAGGCGTTTTAATGCTAAATTATCGCCAAATTTTCTG GGCGATTAGCCCTTGTTAGC
Product: prolyl 4-hydroxylase subunit alpha
Products: NA
Alternate protein names: Prolyl 4-Hydroxylase Subunit Alpha; Proline Hydroxylase; 2OG-Fe(II) Oxygenase; Oxidoreductase 2OG-Fe(II) Oxygenase Family
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MMFEFNFERDMALLREEYTRDAKINIQQVWQNDTAAIIAKTLASEVMFDNAMFVENKPMRVSDQQIRQLPVSTQKDLQQK ILQNASNGIGFLYGSHLVGGLDGKASPELLTSLHRFINRPEMFNFIQAITGIEGICYASLQASRYIQGNFLTRHNDVVES EGRKVAFVFGFTPEWHPDWGGLLQFFTPQGVLTDTWVPTFNNLALFDVHHPHSVSYVAPFARHSRFSVTGWFRTIAPQ
Sequences:
>Translated_238_residues MMFEFNFERDMALLREEYTRDAKINIQQVWQNDTAAIIAKTLASEVMFDNAMFVENKPMRVSDQQIRQLPVSTQKDLQQK ILQNASNGIGFLYGSHLVGGLDGKASPELLTSLHRFINRPEMFNFIQAITGIEGICYASLQASRYIQGNFLTRHNDVVES EGRKVAFVFGFTPEWHPDWGGLLQFFTPQGVLTDTWVPTFNNLALFDVHHPHSVSYVAPFARHSRFSVTGWFRTIAPQ >Mature_238_residues MMFEFNFERDMALLREEYTRDAKINIQQVWQNDTAAIIAKTLASEVMFDNAMFVENKPMRVSDQQIRQLPVSTQKDLQQK ILQNASNGIGFLYGSHLVGGLDGKASPELLTSLHRFINRPEMFNFIQAITGIEGICYASLQASRYIQGNFLTRHNDVVES EGRKVAFVFGFTPEWHPDWGGLLQFFTPQGVLTDTWVPTFNNLALFDVHHPHSVSYVAPFARHSRFSVTGWFRTIAPQ
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27191; Mature: 27191
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMFEFNFERDMALLREEYTRDAKINIQQVWQNDTAAIIAKTLASEVMFDNAMFVENKPMR CEEEECCHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCC VSDQQIRQLPVSTQKDLQQKILQNASNGIGFLYGSHLVGGLDGKASPELLTSLHRFINRP CCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCH EMFNFIQAITGIEGICYASLQASRYIQGNFLTRHNDVVESEGRKVAFVFGFTPEWHPDWG HHHHHHHHHHCCCHHHHHHHHHHHEECCCEEECCCCHHHCCCCEEEEEEECCCCCCCCHH GLLQFFTPQGVLTDTWVPTFNNLALFDVHHPHSVSYVAPFARHSRFSVTGWFRTIAPQ HHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEHHHCCCCC >Mature Secondary Structure MMFEFNFERDMALLREEYTRDAKINIQQVWQNDTAAIIAKTLASEVMFDNAMFVENKPMR CEEEECCHHHHHHHHHHHCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCC VSDQQIRQLPVSTQKDLQQKILQNASNGIGFLYGSHLVGGLDGKASPELLTSLHRFINRP CCHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHCCH EMFNFIQAITGIEGICYASLQASRYIQGNFLTRHNDVVESEGRKVAFVFGFTPEWHPDWG HHHHHHHHHHCCCHHHHHHHHHHHEECCCEEECCCCHHHCCCCEEEEEEECCCCCCCCHH GLLQFFTPQGVLTDTWVPTFNNLALFDVHHPHSVSYVAPFARHSRFSVTGWFRTIAPQ HHHHHCCCCCCEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA