| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is oprP [H]
Identifier: 160874054
GI number: 160874054
Start: 1104164
End: 1105459
Strand: Direct
Name: oprP [H]
Synonym: Sbal195_0934
Alternate gene names: 160874054
Gene position: 1104164-1105459 (Clockwise)
Preceding gene: 160874053
Following gene: 160874055
Centisome position: 20.65
GC content: 49.69
Gene sequence:
>1296_bases ATGCCTAGATTGACCTTACTTGCCGCGGCAACCGCTGTGGCTTTTACTGGTTTTGCGAATGCGCAAGACTTAACGCCACA AGAGCTTCAAGCACAACTCACCCAATTGACTCAAGAAGTTAACCAGCTAAAACAACAGCAGGCAGCGAATGCCACTGTGA CTCCATCTAAGCCTAGCGCGCCAGCTTTTGAGATAGGTGGTCGCATTCAACTCGATTACAACCTCTTCAATGGTGCCTAT AACGCCGAACATAACGGCAGTAGCGCGCAGGATATTTTCCCTCGCCGAGTCCGTACCTTTGTTGAAGGCGAATTACAGGA TTGGGACTACAAGCTACTGCTTGAATTTGCTGAGAATACTGCTGAAATCGTCATGGCTAGGATGCGTTATTCGGGTTTTG AGAATGGCCCTAAACTGCAATTTGGTAAGTTGCGTGAGGATATCAGCCTTGATGCGCTCACCAGCAGTAATCACATTGCG CTGATCGAACGTTCTAGCCTTGCCGATACTATGTCGCCGTACTTCCGCTGGGGTATTTCTGCCTATCAATATTTCCCCAG CACAGGTTTACGTTACGCATTGGGTGTTTATAAAAACGATGCCTTTGGTAGCGATGGCAAAGATGAAACCGATGATTTGA ATTATGCCCTTAGCTCGCGAGTGACTTGGTCACAGGCCAAAGAATCGGGCCAAGTGTTACATGCGGGCTTGTGGTACTCA GCGCGTCAAATGGGCGGCGATGACTTGTCTGCCAGCTTTGCCCGCGGCGAACTGCGCGAGACGAATACTCGCCTGATTAA CTATGTCGCCGGTGGTGAAACCGCAGCGATTGATCGGCTAAATCAAGCGGGTTTAGAGCTGGCATTTCAACATAAGGCTT TGTTACTACAAGGCGAATACGCTCAGCGTAATTTAACGACTCAAGATCCTCAGTCAGTGCTCGATGGTGAGCGTTATCAG GCGTATTACCTGCAGGCGAGTTATTTCTTAACGGGCGAACAGCGCAGCTATTCCAAGGGCAGCGCGGTGTTTTCTCAGCC TAAGGGCGTAACCGAAGCATGGGAATTGGCGGCACGTTTTTCTAGCGTGGATGCAAGCTCCGACTTCCAAGGTACTAAAG CTCAAGGCACTCGGGCTCAGACCTACACCTTAGGCGTGTCTTACTACTTCAATCCAAAAATCAAAGTGATGGCTAACTAC ATCCATTCTTCCGTCGATGGCGCAGGCACGATTGCCTTAGTCGGCAATGAAGATGTGGGCGATGCCTTTGCTGCCCGTTT GCAATACGTGTTTTAG
Upstream 100 bases:
>100_bases CATCCTCTGGACGAGGAAGTAGTCCGTCACAGACCTGACACAATTCTAATAACACAGGCATTCCCACAGGGAATGGCAGA CTGCAATACAGGAGACATTG
Downstream 100 bases:
>100_bases GAGTAATGAATCATGTTGAAAATGAAATCTTTAGTCATGAGTGCGCTGTTACTGAGTGTCTCTGGCATGGCGAGTGCTGA TATCCACTTTATCATTCCTG
Product: phosphate-selective porin O and P
Products: NA
Alternate protein names: Outer membrane protein D1 [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAY NAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIA LIERSSLADTMSPYFRWGISAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKESGQVLHAGLWYS ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDRLNQAGLELAFQHKALLLQGEYAQRNLTTQDPQSVLDGERYQ AYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQGTRAQTYTLGVSYYFNPKIKVMANY IHSSVDGAGTIALVGNEDVGDAFAARLQYVF
Sequences:
>Translated_431_residues MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAY NAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIA LIERSSLADTMSPYFRWGISAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKESGQVLHAGLWYS ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDRLNQAGLELAFQHKALLLQGEYAQRNLTTQDPQSVLDGERYQ AYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQGTRAQTYTLGVSYYFNPKIKVMANY IHSSVDGAGTIALVGNEDVGDAFAARLQYVF >Mature_430_residues PRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSAPAFEIGGRIQLDYNLFNGAYN AEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENTAEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIAL IERSSLADTMSPYFRWGISAYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKESGQVLHAGLWYSA RQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDRLNQAGLELAFQHKALLLQGEYAQRNLTTQDPQSVLDGERYQA YYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARFSSVDASSDFQGTKAQGTRAQTYTLGVSYYFNPKIKVMANYI HSSVDGAGTIALVGNEDVGDAFAARLQYVF
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 47549; Mature: 47418
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSA CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC PAFEIGGRIQLDYNLFNGAYNAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENT CCEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIALIERSSLADTMSPYFRWGIS HHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCH AYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKESGQVLHAGLWYS HHEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCEEEEHHHHH ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDRLNQAGLELAFQHKALLLQGEY HHHCCCCCHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHHHHHCHHEEEECEEEEEECCH AQRNLTTQDPQSVLDGERYQAYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARF HHCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SSVDASSDFQGTKAQGTRAQTYTLGVSYYFNPKIKVMANYIHSSVDGAGTIALVGNEDVG HCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCH DAFAARLQYVF HHHHHHHHHCC >Mature Secondary Structure PRLTLLAAATAVAFTGFANAQDLTPQELQAQLTQLTQEVNQLKQQQAANATVTPSKPSA CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC PAFEIGGRIQLDYNLFNGAYNAEHNGSSAQDIFPRRVRTFVEGELQDWDYKLLLEFAENT CCEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH AEIVMARMRYSGFENGPKLQFGKLREDISLDALTSSNHIALIERSSLADTMSPYFRWGIS HHHHHHHHHHCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCH AYQYFPSTGLRYALGVYKNDAFGSDGKDETDDLNYALSSRVTWSQAKESGQVLHAGLWYS HHEECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCEEEEHHHHH ARQMGGDDLSASFARGELRETNTRLINYVAGGETAAIDRLNQAGLELAFQHKALLLQGEY HHHCCCCCHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHHHHHCHHEEEECEEEEEECCH AQRNLTTQDPQSVLDGERYQAYYLQASYFLTGEQRSYSKGSAVFSQPKGVTEAWELAARF HHCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH SSVDASSDFQGTKAQGTRAQTYTLGVSYYFNPKIKVMANYIHSSVDGAGTIALVGNEDVG HCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCH DAFAARLQYVF HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]