| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874043
Identifier: 160874043
GI number: 160874043
Start: 1088209
End: 1088622
Strand: Reverse
Name: 160874043
Synonym: Sbal195_0923
Alternate gene names: NA
Gene position: 1088622-1088209 (Counterclockwise)
Preceding gene: 160874044
Following gene: 160874042
Centisome position: 20.36
GC content: 42.03
Gene sequence:
>414_bases ATGAATATCCATACCATTGCCAATCACCTCAACAGTCTTGGCAACACCAGCCAAACTGGCTTTCAATTTGATTGTTATCC AATCGATGGTGAAGTCGAAGTGTTGCAAGTGAATGTGGTTGGCCGTGAAGAAATCCCGGTATTTGTATCGGTAACGGACA ACCAAGTGCTCTGCATCAGCTACCTGTGGGGCGAGAACGAAGTAAACCAAGATCGTCGCAGTGAAATGTTTGAAACCATG CTAGAGCTCAACATTCCAATGCCTCTGTCATCCTTTGCAAAAATTGATGACAAATACGTAGTTTACGGTGCGCTATCACT ACAATCTAGCATGCTCGAAATCGAGCAAGAATTATCAGTTTTATCCGATAACTGTTTAGAAGTTATCGATGAAATGGTCG ACTATCTGAAATAA
Upstream 100 bases:
>100_bases TCAGGGACTGAATCTTTTTTAATAGGATGAGATAGTGCTTGACATATTATGTCTCAGTGCTATCTTTGAACACAGACATA ATATGTCAATAAGGACAAAT
Downstream 100 bases:
>100_bases GGAGCCACAAAATGGGCATTCTGAATAAAATTTTAACAGCGTTTCGTGGTGGTGCTACCGAAGTGGGTCAAGGCATCGTT GACGCAAATTCAACCCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNIHTIANHLNSLGNTSQTGFQFDCYPIDGEVEVLQVNVVGREEIPVFVSVTDNQVLCISYLWGENEVNQDRRSEMFETM LELNIPMPLSSFAKIDDKYVVYGALSLQSSMLEIEQELSVLSDNCLEVIDEMVDYLK
Sequences:
>Translated_137_residues MNIHTIANHLNSLGNTSQTGFQFDCYPIDGEVEVLQVNVVGREEIPVFVSVTDNQVLCISYLWGENEVNQDRRSEMFETM LELNIPMPLSSFAKIDDKYVVYGALSLQSSMLEIEQELSVLSDNCLEVIDEMVDYLK >Mature_137_residues MNIHTIANHLNSLGNTSQTGFQFDCYPIDGEVEVLQVNVVGREEIPVFVSVTDNQVLCISYLWGENEVNQDRRSEMFETM LELNIPMPLSSFAKIDDKYVVYGALSLQSSMLEIEQELSVLSDNCLEVIDEMVDYLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15559; Mature: 15559
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHTIANHLNSLGNTSQTGFQFDCYPIDGEVEVLQVNVVGREEIPVFVSVTDNQVLCIS CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCEEEEE YLWGENEVNQDRRSEMFETMLELNIPMPLSSFAKIDDKYVVYGALSLQSSMLEIEQELSV EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH LSDNCLEVIDEMVDYLK HHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIHTIANHLNSLGNTSQTGFQFDCYPIDGEVEVLQVNVVGREEIPVFVSVTDNQVLCIS CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEEEECCCCEEEEE YLWGENEVNQDRRSEMFETMLELNIPMPLSSFAKIDDKYVVYGALSLQSSMLEIEQELSV EEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH LSDNCLEVIDEMVDYLK HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA