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The map label for this gene is ygiM [H]

Identifier: 160874035

GI number: 160874035

Start: 1080637

End: 1081188

Strand: Reverse

Name: ygiM [H]

Synonym: Sbal195_0915

Alternate gene names: 160874035

Gene position: 1081188-1080637 (Counterclockwise)

Preceding gene: 160874036

Following gene: 160874034

Centisome position: 20.22

GC content: 45.65

Gene sequence:

>552_bases
ATGATGTTGCTGTCTTCCAACCTGCTGGCCGAAGGCCAATCCCGTTACATTTCGGATAACGTGTTCCTTTATCTTTTAGG
TGGTCCTGGTACTGAGTTCCGAATTCTTGGCTCAATTGAAGCCGGTCAACCTGTGACACTGCTCAACGAAACCCAAGGTG
ATTACTCTAAAATCATCGACCATAAAGGCCGCGAAGGTTGGGTGCAAACTAACCTAATCAGCTCGACTCAAAGTTTCCGT
GAACAAGTGCCAGCGTTAACCACTGAGCTTGCACAAGCTAAAGCTAAACTAGCGGAAGTATTAAGTTCCACTGATAACCA
CGCCGACGAAGTGACCGAACTGAAGGCTAAACTAAGCGAGTTAGAAACAAACCTAGCCAAAACCACTCAAGAACGTGATG
AGCTTAAAGTCGCGGTTGATCGCTCAGCCCAAGATGAACGTTTTGAACTATGGCGCCAAGGCGGATTAATTGCAGGTATG
GGGTTAATCCTAGGCATTATTTTAGTGTATTTACCTAGACCACAACGTCGCAGTAAAAAACGTTGGATGTAA

Upstream 100 bases:

>100_bases
ATGACTTCCCTCTTGCATTACAGGCCTCAAATCCCTAGCATGTGCAGACTATTTCGTTGATGAGAATACAAAAGTGTTAA
GACTCCTGACTCTGGTAGGA

Downstream 100 bases:

>100_bases
GTCTGACCTGCAAAAAGTCTTATTTTATCTTCCAAAAGCCAGTGTTTTCAAACACTGGCTTTTTTGTCAATCAAGCGTTA
CATCGACTTATACCAATCAC

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELAQAKAKLAEVLSSTDNHADEVTELKAKLSELETNLAKTTQERDELKVAVDRSAQDERFELWRQGGLIAGM
GLILGIILVYLPRPQRRSKKRWM

Sequences:

>Translated_183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELAQAKAKLAEVLSSTDNHADEVTELKAKLSELETNLAKTTQERDELKVAVDRSAQDERFELWRQGGLIAGM
GLILGIILVYLPRPQRRSKKRWM
>Mature_183_residues
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIIDHKGREGWVQTNLISSTQSFR
EQVPALTTELAQAKAKLAEVLSSTDNHADEVTELKAKLSELETNLAKTTQERDELKVAVDRSAQDERFELWRQGGLIAGM
GLILGIILVYLPRPQRRSKKRWM

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=139, Percent_Identity=27.3381294964029, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 20461; Mature: 20461

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIID
CEEECCHHHHCCCHHEECCCEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHH
HKGREGWVQTNLISSTQSFREQVPALTTELAQAKAKLAEVLSSTDNHADEVTELKAKLSE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LETNLAKTTQERDELKVAVDRSAQDERFELWRQGGLIAGMGLILGIILVYLPRPQRRSKK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC
RWM
CCC
>Mature Secondary Structure
MMLLSSNLLAEGQSRYISDNVFLYLLGGPGTEFRILGSIEAGQPVTLLNETQGDYSKIID
CEEECCHHHHCCCHHEECCCEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHH
HKGREGWVQTNLISSTQSFREQVPALTTELAQAKAKLAEVLSSTDNHADEVTELKAKLSE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LETNLAKTTQERDELKVAVDRSAQDERFELWRQGGLIAGMGLILGIILVYLPRPQRRSKK
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHCC
RWM
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]