| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874033
Identifier: 160874033
GI number: 160874033
Start: 1075903
End: 1076646
Strand: Reverse
Name: 160874033
Synonym: Sbal195_0912
Alternate gene names: NA
Gene position: 1076646-1075903 (Counterclockwise)
Preceding gene: 160874034
Following gene: 160874032
Centisome position: 20.13
GC content: 49.73
Gene sequence:
>744_bases ATGACATTTTCGCTGTTAGATATTTCTGCATTGGTGTGGTTTATCGTTTCTTGGGCTGGCTATACCGCCTTTGCCCGTCG TAAGGCGAAAGATACCGACTGTATTGCCCGAGGTCTGCATAAGCATAGAATTTACTGGATGCTTGAGGTGATGACCCGCG GCGTGCGTGTGGGTGATGCGGCACTACTGGCCAACCTTGAGCGCAATATTGCCTTTTTTGCCTCGACCACGCTGTTTGTA CTCGCGGGTGTGCTGACCTTATTTGCACAAGTTGAACGACTAGAAAGTGTTATTGCGACGATTCCCTTCGCCACACCACC GAATCATGCGCTGGTGCAAGTCAAGCTCGCCTTGCTAGTCAGTATTTTTGTGATGGCCTTCTTCCAGTTTACTTGGTCGA TGCGCCAATACGGTTTTGTGAACGTGATGATAGGCGCGGGTCCTTTAGACAGCGATGGCTCGAACGACAATCTCAAAGCC TACGCAAGACAGATGGCGACGGTACAAGATCAAGCGGCGCACTCCTATAACTATGGCTTACGCGCCTATTACTTTTCGAT GGCAGTATTGTGCTGGTTTGTACACCCGATACTCTTTATCTCGGCGAGCTTATTTGTGGTCGCAACCTTATATCGCCGCG AGTTTAAGTCCCGCGCAGTTCTGGCGATCACAGCGGCAAAAGGGCATCTGCAAATAGAGAGTCAAGTGCGGGAAACGGCA CGCAACCATAAAATAGAATCATAA
Upstream 100 bases:
>100_bases TTGCGGGGGATTGCGTACGGCTGATAAAAGCCCTCATAATCACACAGTAATTGAGCTTGATGGTTTTGACTTCTACTTTT GACTTTAAAATAAGGTGGCT
Downstream 100 bases:
>100_bases CCTTAGCGGTTTAGGTCGCAGGTATCATCTTGGTTGAAATTATTGTTCTATACTCTTTGGGTTATGTTTCTATTGAAATA CTGGGAGAGTGCTATGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTFSLLDISALVWFIVSWAGYTAFARRKAKDTDCIARGLHKHRIYWMLEVMTRGVRVGDAALLANLERNIAFFASTTLFV LAGVLTLFAQVERLESVIATIPFATPPNHALVQVKLALLVSIFVMAFFQFTWSMRQYGFVNVMIGAGPLDSDGSNDNLKA YARQMATVQDQAAHSYNYGLRAYYFSMAVLCWFVHPILFISASLFVVATLYRREFKSRAVLAITAAKGHLQIESQVRETA RNHKIES
Sequences:
>Translated_247_residues MTFSLLDISALVWFIVSWAGYTAFARRKAKDTDCIARGLHKHRIYWMLEVMTRGVRVGDAALLANLERNIAFFASTTLFV LAGVLTLFAQVERLESVIATIPFATPPNHALVQVKLALLVSIFVMAFFQFTWSMRQYGFVNVMIGAGPLDSDGSNDNLKA YARQMATVQDQAAHSYNYGLRAYYFSMAVLCWFVHPILFISASLFVVATLYRREFKSRAVLAITAAKGHLQIESQVRETA RNHKIES >Mature_246_residues TFSLLDISALVWFIVSWAGYTAFARRKAKDTDCIARGLHKHRIYWMLEVMTRGVRVGDAALLANLERNIAFFASTTLFVL AGVLTLFAQVERLESVIATIPFATPPNHALVQVKLALLVSIFVMAFFQFTWSMRQYGFVNVMIGAGPLDSDGSNDNLKAY ARQMATVQDQAAHSYNYGLRAYYFSMAVLCWFVHPILFISASLFVVATLYRREFKSRAVLAITAAKGHLQIESQVRETAR NHKIES
Specific function: Unknown
COG id: COG3821
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27802; Mature: 27671
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSLLDISALVWFIVSWAGYTAFARRKAKDTDCIARGLHKHRIYWMLEVMTRGVRVGDA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALLANLERNIAFFASTTLFVLAGVLTLFAQVERLESVIATIPFATPPNHALVQVKLALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SIFVMAFFQFTWSMRQYGFVNVMIGAGPLDSDGSNDNLKAYARQMATVQDQAAHSYNYGL HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RAYYFSMAVLCWFVHPILFISASLFVVATLYRREFKSRAVLAITAAKGHLQIESQVRETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEHHHHHHHH RNHKIES HHCCCCC >Mature Secondary Structure TFSLLDISALVWFIVSWAGYTAFARRKAKDTDCIARGLHKHRIYWMLEVMTRGVRVGDA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH ALLANLERNIAFFASTTLFVLAGVLTLFAQVERLESVIATIPFATPPNHALVQVKLALLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH SIFVMAFFQFTWSMRQYGFVNVMIGAGPLDSDGSNDNLKAYARQMATVQDQAAHSYNYGL HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH RAYYFSMAVLCWFVHPILFISASLFVVATLYRREFKSRAVLAITAAKGHLQIESQVRETA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEHHHHHHHH RNHKIES HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA