| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yheT [H]
Identifier: 160874011
GI number: 160874011
Start: 1050911
End: 1051954
Strand: Reverse
Name: yheT [H]
Synonym: Sbal195_0890
Alternate gene names: 160874011
Gene position: 1051954-1050911 (Counterclockwise)
Preceding gene: 160874014
Following gene: 160874010
Centisome position: 19.67
GC content: 48.56
Gene sequence:
>1044_bases ATGCCAAATTCCTTTATGCCGCCTTGGTGGGCCAAGAGTCCCCATGTACAAACGATTTTACCCGTATTCACTAAAGTGGC CAAACCAGCATTACAGCGGCAGCGCTTAGAGTTGCCCGATGGCGATTTTGTCGATTTAGATTGGCAGGATTTTCCGCAGT CTGGCAAACCTATCGTGGTGATCATCCACGGCTTAGAAGGAAGTGCTCAGTCCCATTATGCGCGGCGGATACTGCAAACC TGTAAAGAACAGCAACTCGCAGCAGTCGTGCACCATCACAGAAGTTGCTCGGGTGAGGCAAATCGCCTCGCGCGCAGTTA TCACAGTGGTGACACGGACGATTTACAGTTTAGTCTATCAACACTGAAAAGCGCGTATCCGCAATCGCCCTTATTAGCCG TAGGTTACAGTTTAGGCGGCAATGTGCTGACTAAGTATCAGGGCGAATATCAGGATGACAGTTTATTAGCTCGCGCAGTG GTTGTCTCGGCGCCGCTGCAATTGTCCGCCTGCGCAAAACGTTTAGAAAATGGTTTTTCGAAGGTATATCAAAGCTATTT AATCAAACAGTTACAGCAAAAAATCAGCCTTAAGCTGAACGATCCGGACCTAGCCATCTCTATGCCGCTGAGCCAGTTGC AGGTCGACCGTTTAAATACCTTCTATGATTTTGACGATAAAGTCACAGCGCCATTGCACGGCTTTGACGGCGTAGACGAT TACTATACGCGTGCCAGTGGTTTACCCTTTGTCAGCCGCATTACTAAACCGACGCTTATCATCCATGCCAAGGACGATCC CTTTATGACAGATGAAGTGATCCCCCAGCCAAACCAATTATCGGGTTATGTAGAATACGAACTGCATCCCTATGGCGGTC ATGTTGGCTTTATCGAAGGCGGTACACCTTGGAAACCGCGCTTCTATCTTGAGCGACGGATTTTACACTTTTTACTCGGC GATCAAAGTGTTGACCCACTTAGCGTAGACCCCATCAACGGCGACAATATTCTCCAAGGAAGCACCGATGCTCATTCCCT ATGA
Upstream 100 bases:
>100_bases GCGACCTCAAAATAAGAATTTCAGCCTTTTGAAGTCGCTTGGATATAAATTAAACACACGTTTTAATTTTCAGCAATAGC CGATACCAAGATAAACACCC
Downstream 100 bases:
>100_bases AACCCTGTTACAACTCCCGCAGGAAACGCTGGCCAATCTGATCCGCGAATATCTCTTCGGTCAAGTGGAGGATGGCAGCT TTGCCAGTCTCGATGAGCAG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQT CKEQQLAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAV VVSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISLKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQPNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLG DQSVDPLSVDPINGDNILQGSTDAHSL
Sequences:
>Translated_347_residues MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQT CKEQQLAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAV VVSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISLKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQPNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLG DQSVDPLSVDPINGDNILQGSTDAHSL >Mature_346_residues PNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVVIIHGLEGSAQSHYARRILQTC KEQQLAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLSTLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVV VSAPLQLSACAKRLENGFSKVYQSYLIKQLQQKISLKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDDY YTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQPNQLSGYVEYELHPYGGHVGFIEGGTPWKPRFYLERRILHFLLGD QSVDPLSVDPINGDNILQGSTDAHSL
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=328, Percent_Identity=28.0487804878049, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194578891, Length=330, Percent_Identity=30.3030303030303, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI23397659, Length=342, Percent_Identity=24.8538011695906, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI23397661, Length=342, Percent_Identity=24.8538011695906, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI269315865, Length=344, Percent_Identity=26.7441860465116, Blast_Score=81, Evalue=2e-15, Organism=Escherichia coli, GI1789752, Length=313, Percent_Identity=45.3674121405751, Blast_Score=265, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17566110, Length=311, Percent_Identity=26.3665594855305, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71985405, Length=311, Percent_Identity=26.0450160771704, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI71985413, Length=193, Percent_Identity=24.8704663212435, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6323866, Length=259, Percent_Identity=25.4826254826255, Blast_Score=108, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6325162, Length=269, Percent_Identity=26.3940520446097, Blast_Score=93, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6319655, Length=297, Percent_Identity=26.5993265993266, Blast_Score=93, Evalue=8e-20, Organism=Drosophila melanogaster, GI24652003, Length=326, Percent_Identity=26.6871165644172, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI281398151, Length=326, Percent_Identity=26.6871165644172, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24581365, Length=335, Percent_Identity=27.7611940298507, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38815; Mature: 38684
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEE IIHGLEGSAQSHYARRILQTCKEQQLAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH TLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVVVSAPLQLSACAKRLENGFS HHHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH KVYQSYLIKQLQQKISLKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD HHHHHHHHHHHHHHHCEEECCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHH YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQPNQLSGYVEYELHPYGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECC GTPWKPRFYLERRILHFLLGDQSVDPLSVDPINGDNILQGSTDAHSL CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure PNSFMPPWWAKSPHVQTILPVFTKVAKPALQRQRLELPDGDFVDLDWQDFPQSGKPIVV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHCCCCCCCEEE IIHGLEGSAQSHYARRILQTCKEQQLAAVVHHHRSCSGEANRLARSYHSGDTDDLQFSLS EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHH TLKSAYPQSPLLAVGYSLGGNVLTKYQGEYQDDSLLARAVVVSAPLQLSACAKRLENGFS HHHHHCCCCCCEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH KVYQSYLIKQLQQKISLKLNDPDLAISMPLSQLQVDRLNTFYDFDDKVTAPLHGFDGVDD HHHHHHHHHHHHHHHCEEECCCCEEEECCHHHHHHHHHHHHCCCCCCEECCCCCCCCCHH YYTRASGLPFVSRITKPTLIIHAKDDPFMTDEVIPQPNQLSGYVEYELHPYGGHVGFIEG HHHHHCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECC GTPWKPRFYLERRILHFLLGDQSVDPLSVDPINGDNILQGSTDAHSL CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]