| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is csgB [C]
Identifier: 160873998
GI number: 160873998
Start: 1038903
End: 1039322
Strand: Reverse
Name: csgB [C]
Synonym: Sbal195_0877
Alternate gene names: 160873998
Gene position: 1039322-1038903 (Counterclockwise)
Preceding gene: 160873999
Following gene: 160873997
Centisome position: 19.44
GC content: 45.48
Gene sequence:
>420_bases GTGCCAAATACCTCTATACGCTTTTTGGTACCGCTGATCTTGCTCTGTAGTTGTATGACCTCAGCACAAGAGCTGAATGT CAATGAGTTACCCGTAACCCTGCAGGCATTAATGGAACGTTCCGGTCGCGATAACCTTATCGAACTGGTGCAACAAGGCA ATGCTAACCAAGGATTACTGTTCCAATCAGGCAACGATAACAAGGCCGATGTGACACAAGTGGGCAATGATAACGATGCG CTAATCACGCAGATTGGTTCAAACAATGAGGTGCAACTACTGCAGGTCGGCAGTCGCAATACGGCTTCAGTGACACAAAT TGGCAACAACAATCTAGTGCAACTGAACCAACTAGGAAGCGGCAATTTTTCGATTCAACAGATTGCAGACGGTGCTGCAA TCTCAATAACTCAATATTAA
Upstream 100 bases:
>100_bases GGCCAATTGCGGCATATTAACGGGACTCGTATCTTCAGGGCTGAATTTGGAGTGTCTGTTGTTTTAGACACCCCAAGATA TTTGATGCAAGGAGTCACCC
Downstream 100 bases:
>100_bases ACAGGGAGCGTCACATGAAATCACAAGCTAAAAAATCACTTATTGCTTTAGCCATTGCAACGGGTTTAAGCGGTCAAGCT TTTGCCGCCAGTACTGTAAG
Product: curlin-associated protein
Products: NA
Alternate protein names: Minor Curlin Subunit CsgB
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPNTSIRFLVPLILLCSCMTSAQELNVNELPVTLQALMERSGRDNLIELVQQGNANQGLLFQSGNDNKADVTQVGNDNDA LITQIGSNNEVQLLQVGSRNTASVTQIGNNNLVQLNQLGSGNFSIQQIADGAAISITQY
Sequences:
>Translated_139_residues MPNTSIRFLVPLILLCSCMTSAQELNVNELPVTLQALMERSGRDNLIELVQQGNANQGLLFQSGNDNKADVTQVGNDNDA LITQIGSNNEVQLLQVGSRNTASVTQIGNNNLVQLNQLGSGNFSIQQIADGAAISITQY >Mature_138_residues PNTSIRFLVPLILLCSCMTSAQELNVNELPVTLQALMERSGRDNLIELVQQGNANQGLLFQSGNDNKADVTQVGNDNDAL ITQIGSNNEVQLLQVGSRNTASVTQIGNNNLVQLNQLGSGNFSIQQIADGAAISITQY
Specific function: Curlin Is The Structural Subunit Of The Curli. Curli Are Coiled Surface Structures That Assemble Preferentially At Growth Temperatures Below 37 Degrees Celsius. Curli Can Bind To Fibronectin. The Minor Subunit Is The Nucleation Component Of Curlin Monome
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14901; Mature: 14770
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTSIRFLVPLILLCSCMTSAQELNVNELPVTLQALMERSGRDNLIELVQQGNANQGLL CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEE FQSGNDNKADVTQVGNDNDALITQIGSNNEVQLLQVGSRNTASVTQIGNNNLVQLNQLGS EECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCC GNFSIQQIADGAAISITQY CCEEHEEECCCCEEEEECC >Mature Secondary Structure PNTSIRFLVPLILLCSCMTSAQELNVNELPVTLQALMERSGRDNLIELVQQGNANQGLL CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEE FQSGNDNKADVTQVGNDNDALITQIGSNNEVQLLQVGSRNTASVTQIGNNNLVQLNQLGS EECCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCC GNFSIQQIADGAAISITQY CCEEHEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA