| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873983
Identifier: 160873983
GI number: 160873983
Start: 1017424
End: 1017993
Strand: Reverse
Name: 160873983
Synonym: Sbal195_0862
Alternate gene names: NA
Gene position: 1017993-1017424 (Counterclockwise)
Preceding gene: 160873984
Following gene: 160873982
Centisome position: 19.04
GC content: 47.37
Gene sequence:
>570_bases GTGATTTCAGCTCATCACACTCCATGGAGACAAATTAAACCCGCCTTAAGACAATCGGGGTTTAGCTTATCCGAACTGAT GATTGCCATGGTATTAGGCCTGATCATCATGATCGCTGTGATCAATTTCTTTGCGCCACTTAAGGCCACCGTTGAGGAAA GTAAACGTCTAGAAAATGCCGCTGACGCCTTAAGATACGCCACGCTAACGCTCAGTAAAAGCATCAAACAGGCTGATAAC GTCGCAAATGTATCGGCTAACGAACTCGTCTTAAGCACGCTCGCCTCTGCAAGCCAACCGAGTATTAGCTGTTTAGGCCA AAGTAAAACCGCTGATTACATTGAAACATTTAGCTTTATGGCACCTAACTTATCCTGCAACGATGGTGATGGCGCGCAAA CACTCCTCACCGGGCTAGAAGCGGCTCACTTCTCGCAAGCTGGTGAACTCGTCAGTATCAATCTGAAGCCCTTAGCTTTG CCGACGCAATATGGTCAGGGTATTAGCTTGCAGGTCGCACTGCGTAAACCCCTTTGGCAACAAGCCATTAATTCACAACA AGTGCCATAG
Upstream 100 bases:
>100_bases ACAACATGGCAATTACTGTGACTTGGCAAGATGGTCGAGTCGATACCGATAATAGCGTCAGTCTTAACGCCAGTTTTCCC CATCTGTGTAAGGCCTAACT
Downstream 100 bases:
>100_bases GCACAAGGAAGCACAGACATGCACACGGGACGCTCATTTGCTCACGCTTCGCCACCTCGCGGCAGTATCAATAAGCAAAA GGGTGCAGTGTTACTTATCG
Product: prepilin-type cleavage/methylation-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL PTQYGQGISLQVALRKPLWQQAINSQQVP
Sequences:
>Translated_189_residues MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL PTQYGQGISLQVALRKPLWQQAINSQQVP >Mature_189_residues MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL PTQYGQGISLQVALRKPLWQQAINSQQVP
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20311; Mature: 20311
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENA CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADALRYATLTLSKSIKQADNVANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH APNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLALPTQYGQGISLQVALRKPLWQ CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCEEEHHHHHHHHH QAINSQQVP HHHCCCCCC >Mature Secondary Structure MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENA CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADALRYATLTLSKSIKQADNVANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFM HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH APNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLALPTQYGQGISLQVALRKPLWQ CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCEEEHHHHHHHHH QAINSQQVP HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA