The gene/protein map for NC_009997 is currently unavailable.
Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

Click here to switch to the map view.

The map label for this gene is 160873983

Identifier: 160873983

GI number: 160873983

Start: 1017424

End: 1017993

Strand: Reverse

Name: 160873983

Synonym: Sbal195_0862

Alternate gene names: NA

Gene position: 1017993-1017424 (Counterclockwise)

Preceding gene: 160873984

Following gene: 160873982

Centisome position: 19.04

GC content: 47.37

Gene sequence:

>570_bases
GTGATTTCAGCTCATCACACTCCATGGAGACAAATTAAACCCGCCTTAAGACAATCGGGGTTTAGCTTATCCGAACTGAT
GATTGCCATGGTATTAGGCCTGATCATCATGATCGCTGTGATCAATTTCTTTGCGCCACTTAAGGCCACCGTTGAGGAAA
GTAAACGTCTAGAAAATGCCGCTGACGCCTTAAGATACGCCACGCTAACGCTCAGTAAAAGCATCAAACAGGCTGATAAC
GTCGCAAATGTATCGGCTAACGAACTCGTCTTAAGCACGCTCGCCTCTGCAAGCCAACCGAGTATTAGCTGTTTAGGCCA
AAGTAAAACCGCTGATTACATTGAAACATTTAGCTTTATGGCACCTAACTTATCCTGCAACGATGGTGATGGCGCGCAAA
CACTCCTCACCGGGCTAGAAGCGGCTCACTTCTCGCAAGCTGGTGAACTCGTCAGTATCAATCTGAAGCCCTTAGCTTTG
CCGACGCAATATGGTCAGGGTATTAGCTTGCAGGTCGCACTGCGTAAACCCCTTTGGCAACAAGCCATTAATTCACAACA
AGTGCCATAG

Upstream 100 bases:

>100_bases
ACAACATGGCAATTACTGTGACTTGGCAAGATGGTCGAGTCGATACCGATAATAGCGTCAGTCTTAACGCCAGTTTTCCC
CATCTGTGTAAGGCCTAACT

Downstream 100 bases:

>100_bases
GCACAAGGAAGCACAGACATGCACACGGGACGCTCATTTGCTCACGCTTCGCCACCTCGCGGCAGTATCAATAAGCAAAA
GGGTGCAGTGTTACTTATCG

Product: prepilin-type cleavage/methylation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN
VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL
PTQYGQGISLQVALRKPLWQQAINSQQVP

Sequences:

>Translated_189_residues
MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN
VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL
PTQYGQGISLQVALRKPLWQQAINSQQVP
>Mature_189_residues
MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENAADALRYATLTLSKSIKQADN
VANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFMAPNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLAL
PTQYGQGISLQVALRKPLWQQAINSQQVP

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20311; Mature: 20311

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADALRYATLTLSKSIKQADNVANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH
APNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLALPTQYGQGISLQVALRKPLWQ
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCEEEHHHHHHHHH
QAINSQQVP
HHHCCCCCC
>Mature Secondary Structure
MISAHHTPWRQIKPALRQSGFSLSELMIAMVLGLIIMIAVINFFAPLKATVEESKRLENA
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADALRYATLTLSKSIKQADNVANVSANELVLSTLASASQPSISCLGQSKTADYIETFSFM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHH
APNLSCNDGDGAQTLLTGLEAAHFSQAGELVSINLKPLALPTQYGQGISLQVALRKPLWQ
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCCCCCEEEHHHHHHHHH
QAINSQQVP
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA