| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873982
Identifier: 160873982
GI number: 160873982
Start: 1015762
End: 1017405
Strand: Reverse
Name: 160873982
Synonym: Sbal195_0861
Alternate gene names: NA
Gene position: 1017405-1015762 (Counterclockwise)
Preceding gene: 160873983
Following gene: 160873981
Centisome position: 19.03
GC content: 47.87
Gene sequence:
>1644_bases ATGCACACGGGACGCTCATTTGCTCACGCTTCGCCACCTCGCGGCAGTATCAATAAGCAAAAGGGTGCAGTGTTACTTAT CGTCTTAGTCTTCAGCCTATTAGCCAGTTTATTAGTCGTGACATCATTGCGAGATAACTTAGTACAAGAGCGACTGAGCG GGAATTTCCAGAAGCAAGTCAATGCGCAACTCACCGCCGAACAAGGCATGTATGAAAGCTATAACACTCTCAAAGCGACT TTAATTAAAGTACCCCAAAGCACTACGACCTCCTTAAATGACAGCCTGCCAAAAAGTGCCTCAGGCAGTATCGACAGCAG CGCCTATACGTTGACAAAAACCGTGACCCCGAGCGCCGAACTCAGCGTCAACAGCACAGGGCAACACTTAGAGGGTCAAG CGAAACTCAATGCACTCTTTGCCCTAAAGGGCGCAAAGGGTAATAACATTTTTAACGATGCCATCGTTTCCTGCGAGAGC CTCAATCTCACCGGCAGTAGTACAATCGATGGTTATGACTCACGAAAAGGCGCCTACGGCGATAGCTTCAACAATGCTCA AGGCAACAACCAACTCAATAAGCATGGCAAAGGCAATGTAACGACGGTTGAACCGAATGCCGATGTAACCTTGTCGGGCA ATTCGCCGATTTACGGCGATGTCAGTGCAACGGGAAATGTCACCCTAACAGGCTCATCGTCCCTAATTGGCAATATTCAA GGCAATAAAGATGTCATCTTAGGCACAGGTACTGTCGGGGGAAATATCGCTGCGGGTCAGAATTTCGAGCTAAAGAATAG TGGGACAGTTGAAGGCTCAGTGCAAGCCAATAACAACGCATCAACGGCTCCCGGTGCCAAAGTGAATGGGACGCTTCAAT ATGGCGGTGATGGCAACTTCCATCAAAATAGCAGCATTGGCCAAGCAGTGAAACAAGTGCCTAATGTCCCTCCCGTCCCC ACTAAGTCCTGTGATCCATTAGATATTGGTGCCGTAATGGGAGGGTTTAAAATGCCCAACAATGGCGCGAGAACAATTGC ATCAACCCAGAATGTCACCATTTCCCCAACGGGTTCGACTGCGAGTTCAGGTAACAGTAATGCGTTTCCAGCACTGTCCT CAAGCTCCGAAAACATCTTCGGTTCTGAAACCCCAGTATTTAATCTCGACAGTTTAGTCATGAGTAGCGATGGTGTATTA AACATCAGCGGTGGGGATGTCACACTGATCATCAATGGTGACTTTAAAATGAGTGGCGCAAACCAACTCAATATCGCCCC AGGCTCAAGCCTAACGCTATTTGTGAATGGTGAGATTTCCTTTACGGCGGGTACCAATAACGGTAATAGCATTAAAAGCC AAACCCTAACCAGCAGCAATAAACCGCCGTTAGCGATTTATTCGAGTTCAAATAAAGATGTTACTGTCAGTGGAAGCGTG CCGATTTACGCCGCGCTTTATGCGCCTAAATCCAAAGTCAATCTGCCCGGTGGCCCCGAAATCTTCGGCTCAGTAAGAGG AAAATCCATCACCGCCACGGGCAATGGCAAGATCCATTATGACAATGCCCTAGGCGAAGCCGATTTGGGCAGTGACAATG CCATTCCACCCGCGATATTGCTTAAAGGTTGGCAATATTTATAA
Upstream 100 bases:
>100_bases ATATGGTCAGGGTATTAGCTTGCAGGTCGCACTGCGTAAACCCCTTTGGCAACAAGCCATTAATTCACAACAAGTGCCAT AGGCACAAGGAAGCACAGAC
Downstream 100 bases:
>100_bases ACTTGAATTATTGGCCGTATCCCATATACGGCCAAGTACAACACACCTCATCAGCAATAAACTCACCGCTTAAATTTCAA ACTGAGAGTTAGATCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MHTGRSFAHASPPRGSINKQKGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLTAEQGMYESYNTLKAT LIKVPQSTTTSLNDSLPKSASGSIDSSAYTLTKTVTPSAELSVNSTGQHLEGQAKLNALFALKGAKGNNIFNDAIVSCES LNLTGSSTIDGYDSRKGAYGDSFNNAQGNNQLNKHGKGNVTTVEPNADVTLSGNSPIYGDVSATGNVTLTGSSSLIGNIQ GNKDVILGTGTVGGNIAAGQNFELKNSGTVEGSVQANNNASTAPGAKVNGTLQYGGDGNFHQNSSIGQAVKQVPNVPPVP TKSCDPLDIGAVMGGFKMPNNGARTIASTQNVTISPTGSTASSGNSNAFPALSSSSENIFGSETPVFNLDSLVMSSDGVL NISGGDVTLIINGDFKMSGANQLNIAPGSSLTLFVNGEISFTAGTNNGNSIKSQTLTSSNKPPLAIYSSSNKDVTVSGSV PIYAALYAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGEADLGSDNAIPPAILLKGWQYL
Sequences:
>Translated_547_residues MHTGRSFAHASPPRGSINKQKGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLTAEQGMYESYNTLKAT LIKVPQSTTTSLNDSLPKSASGSIDSSAYTLTKTVTPSAELSVNSTGQHLEGQAKLNALFALKGAKGNNIFNDAIVSCES LNLTGSSTIDGYDSRKGAYGDSFNNAQGNNQLNKHGKGNVTTVEPNADVTLSGNSPIYGDVSATGNVTLTGSSSLIGNIQ GNKDVILGTGTVGGNIAAGQNFELKNSGTVEGSVQANNNASTAPGAKVNGTLQYGGDGNFHQNSSIGQAVKQVPNVPPVP TKSCDPLDIGAVMGGFKMPNNGARTIASTQNVTISPTGSTASSGNSNAFPALSSSSENIFGSETPVFNLDSLVMSSDGVL NISGGDVTLIINGDFKMSGANQLNIAPGSSLTLFVNGEISFTAGTNNGNSIKSQTLTSSNKPPLAIYSSSNKDVTVSGSV PIYAALYAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGEADLGSDNAIPPAILLKGWQYL >Mature_547_residues MHTGRSFAHASPPRGSINKQKGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQVNAQLTAEQGMYESYNTLKAT LIKVPQSTTTSLNDSLPKSASGSIDSSAYTLTKTVTPSAELSVNSTGQHLEGQAKLNALFALKGAKGNNIFNDAIVSCES LNLTGSSTIDGYDSRKGAYGDSFNNAQGNNQLNKHGKGNVTTVEPNADVTLSGNSPIYGDVSATGNVTLTGSSSLIGNIQ GNKDVILGTGTVGGNIAAGQNFELKNSGTVEGSVQANNNASTAPGAKVNGTLQYGGDGNFHQNSSIGQAVKQVPNVPPVP TKSCDPLDIGAVMGGFKMPNNGARTIASTQNVTISPTGSTASSGNSNAFPALSSSSENIFGSETPVFNLDSLVMSSDGVL NISGGDVTLIINGDFKMSGANQLNIAPGSSLTLFVNGEISFTAGTNNGNSIKSQTLTSSNKPPLAIYSSSNKDVTVSGSV PIYAALYAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGEADLGSDNAIPPAILLKGWQYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56160; Mature: 56160
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTGRSFAHASPPRGSINKQKGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQV CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC NAQLTAEQGMYESYNTLKATLIKVPQSTTTSLNDSLPKSASGSIDSSAYTLTKTVTPSAE CEEEECCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE LSVNSTGQHLEGQAKLNALFALKGAKGNNIFNDAIVSCESLNLTGSSTIDGYDSRKGAYG EEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCC DSFNNAQGNNQLNKHGKGNVTTVEPNADVTLSGNSPIYGDVSATGNVTLTGSSSLIGNIQ CCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCEEEECC GNKDVILGTGTVGGNIAAGQNFELKNSGTVEGSVQANNNASTAPGAKVNGTLQYGGDGNF CCCEEEEECCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCC HQNSSIGQAVKQVPNVPPVPTKSCDPLDIGAVMGGFKMPNNGARTIASTQNVTISPTGST CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCEEEECCCCC ASSGNSNAFPALSSSSENIFGSETPVFNLDSLVMSSDGVLNISGGDVTLIINGDFKMSGA CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHEECCCCEEEECCCEEEEEECCCEEECCC NQLNIAPGSSLTLFVNGEISFTAGTNNGNSIKSQTLTSSNKPPLAIYSSSNKDVTVSGSV CEEEECCCCEEEEEECCEEEEEECCCCCCCCCHHEECCCCCCCEEEEECCCCCEEEECCC PIYAALYAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGEADLGSDNAIPPAIL CEEEEEECCCCCCCCCCCHHHHEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHH LKGWQYL HCCCCCC >Mature Secondary Structure MHTGRSFAHASPPRGSINKQKGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQV CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC NAQLTAEQGMYESYNTLKATLIKVPQSTTTSLNDSLPKSASGSIDSSAYTLTKTVTPSAE CEEEECCCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE LSVNSTGQHLEGQAKLNALFALKGAKGNNIFNDAIVSCESLNLTGSSTIDGYDSRKGAYG EEECCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCCCCC DSFNNAQGNNQLNKHGKGNVTTVEPNADVTLSGNSPIYGDVSATGNVTLTGSSSLIGNIQ CCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCEEEECC GNKDVILGTGTVGGNIAAGQNFELKNSGTVEGSVQANNNASTAPGAKVNGTLQYGGDGNF CCCEEEEECCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCCC HQNSSIGQAVKQVPNVPPVPTKSCDPLDIGAVMGGFKMPNNGARTIASTQNVTISPTGST CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCEEEECCCCC ASSGNSNAFPALSSSSENIFGSETPVFNLDSLVMSSDGVLNISGGDVTLIINGDFKMSGA CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHEECCCCEEEECCCEEEEEECCCEEECCC NQLNIAPGSSLTLFVNGEISFTAGTNNGNSIKSQTLTSSNKPPLAIYSSSNKDVTVSGSV CEEEECCCCEEEEEECCEEEEEECCCCCCCCCHHEECCCCCCCEEEEECCCCCEEEECCC PIYAALYAPKSKVNLPGGPEIFGSVRGKSITATGNGKIHYDNALGEADLGSDNAIPPAIL CEEEEEECCCCCCCCCCCHHHHEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCHHHH LKGWQYL HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA