| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yqiA [H]
Identifier: 160873939
GI number: 160873939
Start: 955366
End: 955941
Strand: Direct
Name: yqiA [H]
Synonym: Sbal195_0817
Alternate gene names: 160873939
Gene position: 955366-955941 (Clockwise)
Preceding gene: 160873938
Following gene: 160873940
Centisome position: 17.87
GC content: 45.31
Gene sequence:
>576_bases ATGCTGCTTTATATTCACGGATTTAATAGCTCACCCTTTTCAGATAAAGCTGTGATGACGGCTAAGTACATGGCGCAGCA TCACCCGAGTGTGACCTTTCATCAGCCTCAATTGCCCAATACACCCAAGGCTGCCATGGCGCTGTTAACCACTTATGTTG AGGCGGCTCTCGATGCCAAAGAGCCATTAGCTTACATAGGCTCATCGTTAGGCGGATATTTTGCCAGCTATTTAGCCGAA ACTTATGGCGGCAAAGCTGTGTTAGTCAATCCAGCGGTAAAACCCTTTGAATTGTTTGATGAGTTTATGGGGCCGCAATT TAATCCCTATACCGAACAGCATTATCTTGTCATGCCCGAGCATAAGCGGGAAGTTGCTGAATTTAATACAGCTGTTATCC GCAATCCGGATCGTTTTTTGGTATTATTGCAGACGGGTGATGAAGTGCTGGATTATCGAGAAGCGGTCAATAAGTACCAT CACTGCCAATTGCGAATTGAAGCGGGAGGCGATCACAGTTTTGTTGGCTACGAATCGCATCTGCAAACTGTAAGCCAATT TTTACACTTACCTTGA
Upstream 100 bases:
>100_bases GTAGCATCAACACTAAAGTGTATCGCGTACCGGGTAACCATTTTTCCCCCGACAACAACTCAAGCGGTTATTAACGCGAA TAACCGCAGCCTGAGGAAAT
Downstream 100 bases:
>100_bases CAAACAGACATGCCGAGCCGCAACATGGCCGGATATAACAACCTATAGCGTGCCCTATGACGAATCAATACACCTCTGAC GCCATTGAAGTTCTCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MLLYIHGFNSSPFSDKAVMTAKYMAQHHPSVTFHQPQLPNTPKAAMALLTTYVEAALDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVMPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP
Sequences:
>Translated_191_residues MLLYIHGFNSSPFSDKAVMTAKYMAQHHPSVTFHQPQLPNTPKAAMALLTTYVEAALDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVMPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP >Mature_191_residues MLLYIHGFNSSPFSDKAVMTAKYMAQHHPSVTFHQPQLPNTPKAAMALLTTYVEAALDAKEPLAYIGSSLGGYFASYLAE TYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVMPEHKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYH HCQLRIEAGGDHSFVGYESHLQTVSQFLHLP
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=189, Percent_Identity=43.3862433862434, Blast_Score=162, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21539; Mature: 21539
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLYIHGFNSSPFSDKAVMTAKYMAQHHPSVTFHQPQLPNTPKAAMALLTTYVEAALDAK CEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCC EPLAYIGSSLGGYFASYLAETYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVMPE CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCH HKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYHHCQLRIEAGGDHSFVGYESH HHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCHHHEEEEEEEECCCCCCCCHHHH LQTVSQFLHLP HHHHHHHHCCC >Mature Secondary Structure MLLYIHGFNSSPFSDKAVMTAKYMAQHHPSVTFHQPQLPNTPKAAMALLTTYVEAALDAK CEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCC EPLAYIGSSLGGYFASYLAETYGGKAVLVNPAVKPFELFDEFMGPQFNPYTEQHYLVMPE CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCH HKREVAEFNTAVIRNPDRFLVLLQTGDEVLDYREAVNKYHHCQLRIEAGGDHSFVGYESH HHHHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHCHHHEEEEEEEECCCCCCCCHHHH LQTVSQFLHLP HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]