| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873932
Identifier: 160873932
GI number: 160873932
Start: 949592
End: 950074
Strand: Direct
Name: 160873932
Synonym: Sbal195_0810
Alternate gene names: NA
Gene position: 949592-950074 (Clockwise)
Preceding gene: 160873930
Following gene: 160873933
Centisome position: 17.76
GC content: 44.93
Gene sequence:
>483_bases ATGGAGTTTAAGACATTGAAACCAATATTCAAACAGCTGTTTAATTGTCTAGTTTTATCTTGTGCATCATTTTCAGCGTT GGCGAGCGTGATAGTGACCGAAGGTCATGTACGCGCCATGCCTGAGACAGTACCAAATACTGCCGCCTACTTTACGCTTG AAAACCACACAGATAAAGCGGTTCGTCTTATCGGCGTCAGTACTACAGTGGCAAAGGATGCCCAATTACACACTATTATC GAAGACCAAGGCATGGTGAAGATGCGCCATGTTGAAGGTTTTGATATCCCATCCCATGGCGCATTAACGTTAACGCCGTC AGGGGATCACGTCATGTTGCTAGGTTTAAAAGCGCCATTGGTGTTAGAGCAGCAAGTTGAACTGCAATTAGAGTTTGACG ATGGCGAGAAAATGGCGATTACACTGCCTGTTAGTAAAGAAGCAGAAAACGCCGCTGAGCAAGAGCATCATCACCATCAT TAA
Upstream 100 bases:
>100_bases GTTTATCGGGGCGATTAAAGCTGATAATACGTACGCCCTGATCATCCTGAACCTGTATATGACTCATGGGTTGTTTCCTT TACGACGACATTGGGTAGAC
Downstream 100 bases:
>100_bases GGAGTCGCTTGATGCAAATTACATGGAAAAAAGTTACCAGTGTCGGTTTATTTTTAGTATTAATCGGTTATGGCCTGAGT GTATGGTGGAGTATCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MEFKTLKPIFKQLFNCLVLSCASFSALASVIVTEGHVRAMPETVPNTAAYFTLENHTDKAVRLIGVSTTVAKDAQLHTII EDQGMVKMRHVEGFDIPSHGALTLTPSGDHVMLLGLKAPLVLEQQVELQLEFDDGEKMAITLPVSKEAENAAEQEHHHHH
Sequences:
>Translated_160_residues MEFKTLKPIFKQLFNCLVLSCASFSALASVIVTEGHVRAMPETVPNTAAYFTLENHTDKAVRLIGVSTTVAKDAQLHTII EDQGMVKMRHVEGFDIPSHGALTLTPSGDHVMLLGLKAPLVLEQQVELQLEFDDGEKMAITLPVSKEAENAAEQEHHHHH >Mature_160_residues MEFKTLKPIFKQLFNCLVLSCASFSALASVIVTEGHVRAMPETVPNTAAYFTLENHTDKAVRLIGVSTTVAKDAQLHTII EDQGMVKMRHVEGFDIPSHGALTLTPSGDHVMLLGLKAPLVLEQQVELQLEFDDGEKMAITLPVSKEAENAAEQEHHHHH
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007410 [H]
Pfam domain/function: PF04314 DUF461 [H]
EC number: NA
Molecular weight: Translated: 17631; Mature: 17631
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKTLKPIFKQLFNCLVLSCASFSALASVIVTEGHVRAMPETVPNTAAYFTLENHTDKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCCE VRLIGVSTTVAKDAQLHTIIEDQGMVKMRHVEGFDIPSHGALTLTPSGDHVMLLGLKAPL EEEEECCHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCE VLEQQVELQLEFDDGEKMAITLPVSKEAENAAEQEHHHHH EEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCC >Mature Secondary Structure MEFKTLKPIFKQLFNCLVLSCASFSALASVIVTEGHVRAMPETVPNTAAYFTLENHTDKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCCE VRLIGVSTTVAKDAQLHTIIEDQGMVKMRHVEGFDIPSHGALTLTPSGDHVMLLGLKAPL EEEEECCHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCE VLEQQVELQLEFDDGEKMAITLPVSKEAENAAEQEHHHHH EEEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA