| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873924
Identifier: 160873924
GI number: 160873924
Start: 942479
End: 944239
Strand: Direct
Name: 160873924
Synonym: Sbal195_0802
Alternate gene names: NA
Gene position: 942479-944239 (Clockwise)
Preceding gene: 160873923
Following gene: 160873925
Centisome position: 17.63
GC content: 48.44
Gene sequence:
>1761_bases ATGACAGCAATAACGCTTCGGTTTGACACACCTTGGTTAAATGCGGTCAGCCCAATAACAATCAGGTTTATTGACACACC AGTTGTTGTTGATAATTCATTTGGTATCGAGTGTGGATTCAGTTGGTTTACGCTCGATGCTGTTGAACAATCATTATTGT TGGCTGAGTTTTCAAGTGATATTGAATCTAAAATTGAATCACCGTGGGATAATTACAACGCCGATGAGATTAAATTTGAT GCAGTATGGTTATCCAATATTGCAAACGATTCAGTATTATCAATCAATTGGTTATTCAATCTAGATACCCAAACAAACAC TAGCATTAATTGGTCGCTGCCAATTGATCACCAAATTACATTAAGCGTTAACTGGGTTGTGCCAGATGAGTATCAAATAC AATCCTCAATCAACTGGCTGGATATTGCCGCGCACCAGTTACACACGGCAGTCGCATGGATAGATGGTCAAGAACAAGAA AGCGCGTTGGTTATTCAGTACCGTGGCACTGTGGTCGATGATGAAAAGTCGATTAAATGGGGCTTCCACGAACCGCGCTG GGTTTGCTCTACCAAGTACCGCCCTCCCGTTGGTAAGGTCACGCTTCGATTTAATGAGCCATTATCTACACAACCAAACC CTATTGTTTTACGGTTCACGGCCTCACCGAACGTTTGCTACTGGGACGATGGCGGCGGCCTCATTGATGCTAACCCACCA TTACCCAATATCGATTTTAAAATCCCGATTGAACCACAAATCCGCAGGTACTACTTAATGCAGCCAACGATCACATGCGT GCGAGTATCAGACAGTTTACCGATTGTGATCACCAGTGTGAGCATTAGCCAAAGCCGTGGACAGTGGGCGAGGTCGATTA GCCTTGAGTTCTCAAGCCGTATCGATGCGCAGCGTGCTCACAATGAGCTGCTGCTGATCACCATTAACGGTTATGAGTTT TATGCCATTGCCGAGCAGCCAAGCGCCAGCAAAGCCTTTGGTGTTGAAACCCACAGCAGCACAGGCCGATCACGCGCCGC TGAACTGTCATCGCCTTACCTTTTGCCAATCAGCTACACCAACACTGTCTTGCGCAGCCTTGGCGGTATTATCGGTGATC TGTTGCAAAACACAGGCTGGACTGCAGAGCTAAGCGGGATATCAGATTTTAGCGTCCCTGTAGGCGCGTTCAGTGTGGGT AACAAGTCACCGATTGACGCGATTAACGAAGCAGCAAGCCAATTGGGCTGCATGATCTTAGCGGATGATGCCACCCGTAA ATTGACTATCATTCCCCGCTGGCCAACCGTGCCGTGGGAAATGGCAACAGCGGTACCAGACCTAACAGTGCACGATGCCG TGATCACCAACTACAGCGAATCAGTCTCCCGCAATCCATTGTGTGATGTGGTGTGGTTGCGGGGTGAACAACAGGGGATT AGCGCTAAGGTGAAACGCACCGGCAGCGCGGGCAATATTCCTGCTGCTGACATTAGCGCTCAGTTGATCGTCGATAACCA AGCGGCGCGCATCGCTGGCACTAATGCGCTGGCAGATACAGGCGACAAGCTTAACGTCACGCTATCCTTGCCCGTTATGG TTGATTTGCCACCTGCAACGCCTGGCATGCTGATTGGTATTCGTGAAGGTACCGAAGTCTTTAAAGGAACGTGTGATAGT TGGAGTATCCGCGCCAGCGTCAGTGATCGCGGAGATATCGATATCGAACAATCCATTACAGTGATCCGCTCAATCGCGTA A
Upstream 100 bases:
>100_bases TGAACGATACATTGCTAGTTGGTATTTTGGACGACAACCATGTGTACAATTGCAAATTTGTCGATGGTGTACGTGCTGAA AATATTAATGCGAACGCGAT
Downstream 100 bases:
>100_bases CCCTGCTAACAGCCAGCGAGGCACCATGCTTAAACAACTTCAAACAGCGTTAGTATTGCCACGGATGATCATGACTGTAG CTGCAGTAAATGCCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MTAITLRFDTPWLNAVSPITIRFIDTPVVVDNSFGIECGFSWFTLDAVEQSLLLAEFSSDIESKIESPWDNYNADEIKFD AVWLSNIANDSVLSINWLFNLDTQTNTSINWSLPIDHQITLSVNWVVPDEYQIQSSINWLDIAAHQLHTAVAWIDGQEQE SALVIQYRGTVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNVCYWDDGGGLIDANPP LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVITSVSISQSRGQWARSISLEFSSRIDAQRAHNELLLITINGYEF YAIAEQPSASKAFGVETHSSTGRSRAAELSSPYLLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGISDFSVPVGAFSVG NKSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGTEVFKGTCDS WSIRASVSDRGDIDIEQSITVIRSIA
Sequences:
>Translated_586_residues MTAITLRFDTPWLNAVSPITIRFIDTPVVVDNSFGIECGFSWFTLDAVEQSLLLAEFSSDIESKIESPWDNYNADEIKFD AVWLSNIANDSVLSINWLFNLDTQTNTSINWSLPIDHQITLSVNWVVPDEYQIQSSINWLDIAAHQLHTAVAWIDGQEQE SALVIQYRGTVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNVCYWDDGGGLIDANPP LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVITSVSISQSRGQWARSISLEFSSRIDAQRAHNELLLITINGYEF YAIAEQPSASKAFGVETHSSTGRSRAAELSSPYLLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGISDFSVPVGAFSVG NKSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGTEVFKGTCDS WSIRASVSDRGDIDIEQSITVIRSIA >Mature_585_residues TAITLRFDTPWLNAVSPITIRFIDTPVVVDNSFGIECGFSWFTLDAVEQSLLLAEFSSDIESKIESPWDNYNADEIKFDA VWLSNIANDSVLSINWLFNLDTQTNTSINWSLPIDHQITLSVNWVVPDEYQIQSSINWLDIAAHQLHTAVAWIDGQEQES ALVIQYRGTVVDDEKSIKWGFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNVCYWDDGGGLIDANPPL PNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVITSVSISQSRGQWARSISLEFSSRIDAQRAHNELLLITINGYEFY AIAEQPSASKAFGVETHSSTGRSRAAELSSPYLLPISYTNTVLRSLGGIIGDLLQNTGWTAELSGISDFSVPVGAFSVGN KSPIDAINEAASQLGCMILADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGIS AKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPATPGMLIGIREGTEVFKGTCDSW SIRASVSDRGDIDIEQSITVIRSIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64396; Mature: 64265
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAITLRFDTPWLNAVSPITIRFIDTPVVVDNSFGIECGFSWFTLDAVEQSLLLAEFSSD CEEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCEECCEEEEHHHHHHHHHHHHHHHH IESKIESPWDNYNADEIKFDAVWLSNIANDSVLSINWLFNLDTQTNTSINWSLPIDHQIT HHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCEEE LSVNWVVPDEYQIQSSINWLDIAAHQLHTAVAWIDGQEQESALVIQYRGTVVDDEKSIKW EEEEEEECCCEECCCCCCEEEHHHHHHEEEEEEECCCCCCCEEEEEECCEEECCCCCEEE GFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNVCYWDDGGGLIDANPP CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCC LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVITSVSISQSRGQWARSISLEFSSR CCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEHHHC IDAQRAHNELLLITINGYEFYAIAEQPSASKAFGVETHSSTGRSRAAELSSPYLLPISYT CCHHHCCCCEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEEHH NTVLRSLGGIIGDLLQNTGWTAELSGISDFSVPVGAFSVGNKSPIDAINEAASQLGCMIL HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEE ADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI ECCCCCEEEEEECCCCCCHHHHHCCCCCEEEHHHHHCCHHHHCCCCCEEEEEECCCCCCC SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPAT EEEEEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC PGMLIGIREGTEVFKGTCDSWSIRASVSDRGDIDIEQSITVIRSIA CCEEEEEECCCHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHCC >Mature Secondary Structure TAITLRFDTPWLNAVSPITIRFIDTPVVVDNSFGIECGFSWFTLDAVEQSLLLAEFSSD EEEEEEECCCCCCCCCCEEEEEECCCEEEECCCCCEECCEEEEHHHHHHHHHHHHHHHH IESKIESPWDNYNADEIKFDAVWLSNIANDSVLSINWLFNLDTQTNTSINWSLPIDHQIT HHHHHCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEEEECCCCEEE LSVNWVVPDEYQIQSSINWLDIAAHQLHTAVAWIDGQEQESALVIQYRGTVVDDEKSIKW EEEEEEECCCEECCCCCCEEEHHHHHHEEEEEEECCCCCCCEEEEEECCEEECCCCCEEE GFHEPRWVCSTKYRPPVGKVTLRFNEPLSTQPNPIVLRFTASPNVCYWDDGGGLIDANPP CCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCEEECCCC LPNIDFKIPIEPQIRRYYLMQPTITCVRVSDSLPIVITSVSISQSRGQWARSISLEFSSR CCCCCEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEHHHC IDAQRAHNELLLITINGYEFYAIAEQPSASKAFGVETHSSTGRSRAAELSSPYLLPISYT CCHHHCCCCEEEEEECCEEEEEEECCCCCCCEEEEECCCCCCCCHHHHCCCCEEEEEEHH NTVLRSLGGIIGDLLQNTGWTAELSGISDFSVPVGAFSVGNKSPIDAINEAASQLGCMIL HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEE ADDATRKLTIIPRWPTVPWEMATAVPDLTVHDAVITNYSESVSRNPLCDVVWLRGEQQGI ECCCCCEEEEEECCCCCCHHHHHCCCCCEEEHHHHHCCHHHHCCCCCEEEEEECCCCCCC SAKVKRTGSAGNIPAADISAQLIVDNQAARIAGTNALADTGDKLNVTLSLPVMVDLPPAT EEEEEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCCEEEEEEEEEEEEECCCCC PGMLIGIREGTEVFKGTCDSWSIRASVSDRGDIDIEQSITVIRSIA CCEEEEEECCCHHHHCCCCCEEEEEECCCCCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA