| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160873901
Identifier: 160873901
GI number: 160873901
Start: 920452
End: 921129
Strand: Direct
Name: 160873901
Synonym: Sbal195_0779
Alternate gene names: NA
Gene position: 920452-921129 (Clockwise)
Preceding gene: 160873900
Following gene: 160873902
Centisome position: 17.21
GC content: 38.35
Gene sequence:
>678_bases ATGCCAAATGCTGCCATACCAGAGGCCATTACTTGGCTAAGTCCAACTACGATGTTCGCTATCCTTGCTGCGTTTGTCAC AGTTGCTAAGCTAATTTCTTATCTTCATTTTGAAAGACATAAGTTTAATCATAAAAATCTTGAAATAGCTCAGTCCAGTT TGAGTGCCAATCTTCATAAACCAAGTCTGAAGCAAAGATTCCTCACGGAGCATGTTTTTAGCTTGATGTATCGATGTAAG CTCACTTACGACGAGATCAACGTTTTGCTAAGGTATTCAAATCCGAGCCGTGCATTCGAACTTTTTGTGAAGGGAAAGGC TTATTTAAAACTATCTAATAATCTGAATTCGATAACTCTTAATGGACGTTATTGGTCACTACCTATTTGGAAGTGGGAGG TGTATACAAGAGATTTATTGCTTCTCTCGTGTTATGTGATTTTTGGCATTATAGGGACATATGCCATAGCTCCTTTCGTT TATGTTTATGATGACGGCAGCTGGTTTACTGTGCCTAAGCTCTTTGAGTCGTATGGTTTGATTGGAATCATGTGGGCATC ATTGAGTATTTTGGGTTCGTTCATTTTCTGGATATTTGCATTCAAGTCAATAACTTCAATTGGCAATATGAGCGCAGCTT TTAGATTGGTCGAAATTGAGCGTAAATCACTTAAGTGA
Upstream 100 bases:
>100_bases TTGTTTGTAATGCATGTGCTGTTATTAGCAGATCGACAGGGATCTAATATACCAACTTTTGATCCTATAAGTGCGTAGAA CAAACATACAGAGGTTTTGA
Downstream 100 bases:
>100_bases TAAGTAAAACAATAAATCCTCTGTGATTAAGTTTTCACGTATCACATATTTACAAATTCCGAAACGACACTTTTGTCGCT TTTAGCGACACTTTTGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MPNAAIPEAITWLSPTTMFAILAAFVTVAKLISYLHFERHKFNHKNLEIAQSSLSANLHKPSLKQRFLTEHVFSLMYRCK LTYDEINVLLRYSNPSRAFELFVKGKAYLKLSNNLNSITLNGRYWSLPIWKWEVYTRDLLLLSCYVIFGIIGTYAIAPFV YVYDDGSWFTVPKLFESYGLIGIMWASLSILGSFIFWIFAFKSITSIGNMSAAFRLVEIERKSLK
Sequences:
>Translated_225_residues MPNAAIPEAITWLSPTTMFAILAAFVTVAKLISYLHFERHKFNHKNLEIAQSSLSANLHKPSLKQRFLTEHVFSLMYRCK LTYDEINVLLRYSNPSRAFELFVKGKAYLKLSNNLNSITLNGRYWSLPIWKWEVYTRDLLLLSCYVIFGIIGTYAIAPFV YVYDDGSWFTVPKLFESYGLIGIMWASLSILGSFIFWIFAFKSITSIGNMSAAFRLVEIERKSLK >Mature_224_residues PNAAIPEAITWLSPTTMFAILAAFVTVAKLISYLHFERHKFNHKNLEIAQSSLSANLHKPSLKQRFLTEHVFSLMYRCKL TYDEINVLLRYSNPSRAFELFVKGKAYLKLSNNLNSITLNGRYWSLPIWKWEVYTRDLLLLSCYVIFGIIGTYAIAPFVY VYDDGSWFTVPKLFESYGLIGIMWASLSILGSFIFWIFAFKSITSIGNMSAAFRLVEIERKSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25955; Mature: 25824
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNAAIPEAITWLSPTTMFAILAAFVTVAKLISYLHFERHKFNHKNLEIAQSSLSANLHK CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC PSLKQRFLTEHVFSLMYRCKLTYDEINVLLRYSNPSRAFELFVKGKAYLKLSNNLNSITL CHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEE NGRYWSLPIWKWEVYTRDLLLLSCYVIFGIIGTYAIAPFVYVYDDGSWFTVPKLFESYGL CCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEHHHHHHHCCH IGIMWASLSILGSFIFWIFAFKSITSIGNMSAAFRLVEIERKSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PNAAIPEAITWLSPTTMFAILAAFVTVAKLISYLHFERHKFNHKNLEIAQSSLSANLHK CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCC PSLKQRFLTEHVFSLMYRCKLTYDEINVLLRYSNPSRAFELFVKGKAYLKLSNNLNSITL CHHHHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEE NGRYWSLPIWKWEVYTRDLLLLSCYVIFGIIGTYAIAPFVYVYDDGSWFTVPKLFESYGL CCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEEHHHHHHHCCH IGIMWASLSILGSFIFWIFAFKSITSIGNMSAAFRLVEIERKSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA