Click here to switch to the map view.

The map label for this gene is ompA [H]

Identifier: 160873823

GI number: 160873823

Start: 849895

End: 851004

Strand: Direct

Name: ompA [H]

Synonym: Sbal195_0701

Alternate gene names: 160873823

Gene position: 849895-851004 (Clockwise)

Preceding gene: 160873822

Following gene: 160873824

Centisome position: 15.89

GC content: 38.2

Gene sequence:

>1110_bases
ATGGAAAATAATATGTTTCCTTACAGAATACTCCGCCAGACTCACCTTGCTAAACAGTTTATCCTTTTATCCTTATTGTG
TTACGGCGTTACCCATGCTGCAGAGCAACAAAATCCCGCTCAGCTTATTGATGAAGATAAACCTCAAACGTTAATCACTT
TACCTGAAGCATATTTATATATGGGTAGTGAAATTGGCATAAATCATTATCAGCATGGTTGTGAGTCTTGGAGTATTGAT
TGCGATAAAAACAGCACAATGGCAAGCTTTTTTGCGGGTTATCAATTTAATCATCATTTAGCTTTCGAAGTGGCTTATAT
TGATTTAGGAAAAGCAGAAGCAACTTATCTCGAAGCTTCAAAACAAAATATTTATCAAGGTAGTATGCGAGGGCTAAATC
TTTCATCCGTAGCTTCGATTGATTTTGGTGCTGATTTAGCGCTGTTTGCAAAAGCAGGTGTATTTAATTGGCATGGTGAA
AATAAAGGCCCATTTTCTACGATAAAAGCAGATGATTGGTCACCCTCTTTTGGCGTGGGAATGACTTACCAATTAAGTGA
TTCTTGGCAAGCTCGATTGCAATATGAGTACTTTCATCATCTAGGTAATGATGATATTGGTGGTACTAACGCTCATGCAA
CCAGTCTTGGGATTAGCTATCAATTTGGACGTTCAAGACCGGAGGTTATCACTAGTACAGTCATAAATTCGGTAACAAAT
ACAGTGATTAAAGCGACGCCTATTGAATTGGAAGAAGTCACTTTTCCTGTGTTATTTAACTTTGATAGTAGCGAGCTTTT
CTTCGTCGATTCTTTGCAGATTATTATTAATCGCTTAATTCAATTCCCGCAGGCCACTGTCATTTTACGAGGCTATTCTG
ACTCTCAAGGAAGTAGTGAATATAACTTAGCATTATCAAAACGTCGTACTGACAGTATTACCCAATATCTTACAGAACAT
GGGGTAAAACCGCAGCAGATCATCGCGGAGCATTACGGTGAACAATATCCTGTGACAGATAAAATTTCTGAACAACATAA
GCATTTAAATCGCCGTGTTCAGGTGTTACTTCCTCAAACGATAATTCAGCCACAGCAGGAACAACGATAA

Upstream 100 bases:

>100_bases
ATTTACTAGTTAAATCTAAGATGTGACATTAGTGATCTATATTGTACTATTAGCCTGAGCTTTTCTATAATTCATCCCAG
TAGATTTTTACCTAATTACC

Downstream 100 bases:

>100_bases
TGATGTCTATATCCCATCCCAAATATCTGATTTTATCATTATTGCTGCTGTTATTAAGCGCATGTGGTGACGGCAGTAAT
TCTGGCTTTCCAAGTGGTTG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MENNMFPYRILRQTHLAKQFILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGINHYQHGCESWSID
CDKNSTMASFFAGYQFNHHLAFEVAYIDLGKAEATYLEASKQNIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGE
NKGPFSTIKADDWSPSFGVGMTYQLSDSWQARLQYEYFHHLGNDDIGGTNAHATSLGISYQFGRSRPEVITSTVINSVTN
TVIKATPIELEEVTFPVLFNFDSSELFFVDSLQIIINRLIQFPQATVILRGYSDSQGSSEYNLALSKRRTDSITQYLTEH
GVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQVLLPQTIIQPQQEQR

Sequences:

>Translated_369_residues
MENNMFPYRILRQTHLAKQFILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGINHYQHGCESWSID
CDKNSTMASFFAGYQFNHHLAFEVAYIDLGKAEATYLEASKQNIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGE
NKGPFSTIKADDWSPSFGVGMTYQLSDSWQARLQYEYFHHLGNDDIGGTNAHATSLGISYQFGRSRPEVITSTVINSVTN
TVIKATPIELEEVTFPVLFNFDSSELFFVDSLQIIINRLIQFPQATVILRGYSDSQGSSEYNLALSKRRTDSITQYLTEH
GVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQVLLPQTIIQPQQEQR
>Mature_369_residues
MENNMFPYRILRQTHLAKQFILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAYLYMGSEIGINHYQHGCESWSID
CDKNSTMASFFAGYQFNHHLAFEVAYIDLGKAEATYLEASKQNIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGE
NKGPFSTIKADDWSPSFGVGMTYQLSDSWQARLQYEYFHHLGNDDIGGTNAHATSLGISYQFGRSRPEVITSTVINSVTN
TVIKATPIELEEVTFPVLFNFDSSELFFVDSLQIIINRLIQFPQATVILRGYSDSQGSSEYNLALSKRRTDSITQYLTEH
GVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQVLLPQTIIQPQQEQR

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=313, Percent_Identity=25.8785942492013, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 41737; Mature: 41737

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENNMFPYRILRQTHLAKQFILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAYLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCHHHHH
MGSEIGINHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAFEVAYIDLGKAEATYLEAS
CCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHCCEECCEEEEEEEEEECCCCHHHHHHHH
KQNIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVG
HHHHHHHHCCCCCHHHEEECCCCCCHHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCC
MTYQLSDSWQARLQYEYFHHLGNDDIGGTNAHATSLGISYQFGRSRPEVITSTVINSVTN
EEEEECCCHHHHEEHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
TVIKATPIELEEVTFPVLFNFDSSELFFVDSLQIIINRLIQFPQATVILRGYSDSQGSSE
HHEEECCCCHHHEEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
YNLALSKRRTDSITQYLTEHGVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQVLLPQT
EEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECHH
IIQPQQEQR
HCCCCCCCC
>Mature Secondary Structure
MENNMFPYRILRQTHLAKQFILLSLLCYGVTHAAEQQNPAQLIDEDKPQTLITLPEAYLY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCHHHHH
MGSEIGINHYQHGCESWSIDCDKNSTMASFFAGYQFNHHLAFEVAYIDLGKAEATYLEAS
CCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHCCEECCEEEEEEEEEECCCCHHHHHHHH
KQNIYQGSMRGLNLSSVASIDFGADLALFAKAGVFNWHGENKGPFSTIKADDWSPSFGVG
HHHHHHHHCCCCCHHHEEECCCCCCHHHHHHCCEEEECCCCCCCCCEEECCCCCCCCCCC
MTYQLSDSWQARLQYEYFHHLGNDDIGGTNAHATSLGISYQFGRSRPEVITSTVINSVTN
EEEEECCCHHHHEEHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
TVIKATPIELEEVTFPVLFNFDSSELFFVDSLQIIINRLIQFPQATVILRGYSDSQGSSE
HHEEECCCCHHHEEEEEEEECCCCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
YNLALSKRRTDSITQYLTEHGVKPQQIIAEHYGEQYPVTDKISEQHKHLNRRVQVLLPQT
EEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEECHH
IIQPQQEQR
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]