| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873822
Identifier: 160873822
GI number: 160873822
Start: 848582
End: 849412
Strand: Direct
Name: 160873822
Synonym: Sbal195_0700
Alternate gene names: NA
Gene position: 848582-849412 (Clockwise)
Preceding gene: 160873821
Following gene: 160873823
Centisome position: 15.87
GC content: 45.73
Gene sequence:
>831_bases ATGTCACTCGCCTCACCACTAAAGGCAATAAAATTAGCAGTTTTCGGCCAAGCTAAACTAATGCAAATCGCGTGTTATGC CGCCTTGATATTTGGTGCTATGGGTTTGAGTAGCTCAGTGAATGCCGCCGATGAGGCTTTGCCAAAGGAATATATTCCTC TGGTGCAAGGGCTTATCGATGCGGCTAAGGCGAACGATCCAGAAGCCATTGTTAAGCGATTGGCTTACCCACTTAAACGT GAATATCCGATCCCAACGATTCAAAATACCCAGGAAATGGTCGCACGTTTCGATCAAGTATTCGATTCGCAACTAATTGA ACTGATTGCGAATTCTAAGATTGATGCTGATTGGCAGATTATGGGCTGGCGCGGCATTATGCTCGGCAGCGGTGAAGTAT GGCTGGATTTAGATGGCAAGATCATAGCCATTAACTACCAAACACCCGCAGAGGCAAAACTTAAAGTTGAGCTGATCGCT AAGCAAAAAACGGGATTACATGCGAGCGTGAGTGAGTTCGTTAGCCCTGAGTTAACTTGGGAAACCGCTAAGTTTACCAT TCGTGTCGATAATATGGGGAACAGCCAATACCGTTATGCCGCTTGGGCAAAGGGTAAGTCATTGAGCGAAAAGCCAGATC TAGTGCTGAATAAAGGCAAACTCGTATTCGATGGTAGCGGTGGGAATCATTCATACCAATTTCGCAGCGGCCCATACCAG TATCATTGTTATGTCACCGTCTTAGGCACCAGTGATAGCCCTCCAGGTGAGCTAGTGGTGTTTAAAAATGACCAAGAAAT ACTAAAACAAGCCGTCATCAAAGCAGACTAG
Upstream 100 bases:
>100_bases AGTCAGGCATTGCGTCAATCAGCTTAGGTTTTAGTCCTGTGCATTTATGTTATTCTTTGCCTTTGGTCTCAGTAGAGACG TTTGGATGTAAGGGATAAAG
Downstream 100 bases:
>100_bases TCTCGTTTCCCTATCCCTATGAGTGAGATGTAAAGCAGCGATCATGCAACTCATGGTCGTCGCTGCAATTATGGTAATTC TTTAGTGAATCACTCACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSSVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKR EYPIPTIQNTQEMVARFDQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKVELIA KQKTGLHASVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSYQFRSGPYQ YHCYVTVLGTSDSPPGELVVFKNDQEILKQAVIKAD
Sequences:
>Translated_276_residues MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSSVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKR EYPIPTIQNTQEMVARFDQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKVELIA KQKTGLHASVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSYQFRSGPYQ YHCYVTVLGTSDSPPGELVVFKNDQEILKQAVIKAD >Mature_275_residues SLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSSVNAADEALPKEYIPLVQGLIDAAKANDPEAIVKRLAYPLKRE YPIPTIQNTQEMVARFDQVFDSQLIELIANSKIDADWQIMGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKVELIAK QKTGLHASVSEFVSPELTWETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSYQFRSGPYQY HCYVTVLGTSDSPPGELVVFKNDQEILKQAVIKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30390; Mature: 30259
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSSVNAADEALPKEYIPLVQGLID CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH AAKANDPEAIVKRLAYPLKREYPIPTIQNTQEMVARFDQVFDSQLIELIANSKIDADWQI HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKVELIAKQKTGLHASVSEFVSPELTW EEEEEEEEECCEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCEEE ETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSYQFRSGPYQ EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCCCCEEECCCCEE YHCYVTVLGTSDSPPGELVVFKNDQEILKQAVIKAD EEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHCCC >Mature Secondary Structure SLASPLKAIKLAVFGQAKLMQIACYAALIFGAMGLSSSVNAADEALPKEYIPLVQGLID CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH AAKANDPEAIVKRLAYPLKREYPIPTIQNTQEMVARFDQVFDSQLIELIANSKIDADWQI HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE MGWRGIMLGSGEVWLDLDGKIIAINYQTPAEAKLKVELIAKQKTGLHASVSEFVSPELTW EEEEEEEEECCEEEEEECCEEEEEEECCCCCCEEEEEEEEECCCCCCCCHHHHCCCCEEE ETAKFTIRVDNMGNSQYRYAAWAKGKSLSEKPDLVLNKGKLVFDGSGGNHSYQFRSGPYQ EEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEECCCCCCCEEECCCCEE YHCYVTVLGTSDSPPGELVVFKNDQEILKQAVIKAD EEEEEEEEECCCCCCCCEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA