| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873808
Identifier: 160873808
GI number: 160873808
Start: 834586
End: 834882
Strand: Direct
Name: 160873808
Synonym: Sbal195_0686
Alternate gene names: NA
Gene position: 834586-834882 (Clockwise)
Preceding gene: 160873807
Following gene: 160873809
Centisome position: 15.61
GC content: 48.82
Gene sequence:
>297_bases ATGCCAAGACCCAAAAAATGCCGTCAATTATCGAGCTGTGTGCCCTGTAGCCTATTTAAGCCTAATGGGATCCCTGCGGT TAAATTAACTCATATTCAATTAGAGGCCGATGAGTTTGAGGCCCTCGAACTGGGTGACGTCAAAAGATTAAGCCAGCTCG AAGCCGCAGCCTTGATGGGGCTCTCTCGGCAAACTTTTGGATACCTTCTCGCCAATGCCCGTAAAAAGGTGGCGACGGCT ATCACTCAAGGTCAAGCCTTGAGGCTGCCAACCCAAACAGACAAGGATTTATCATGA
Upstream 100 bases:
>100_bases AGCCCGAGTTTCACTATGTGTGCATAAACGTGCACTAAGATCTAAAACACTATTTCAATAGATAAAGACTATTTAAAAAT GAGCTAAAGATATAAACATT
Downstream 100 bases:
>100_bases TTATTGCCATGCCGATGAGCCGCGAACGACTTGCCAGTCACTTTACTAAAGCCGTGCAAATTGGTTTTTATAACGAACAG TTTCAGCTAATTAAGCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MPRPKKCRQLSSCVPCSLFKPNGIPAVKLTHIQLEADEFEALELGDVKRLSQLEAAALMGLSRQTFGYLLANARKKVATA ITQGQALRLPTQTDKDLS
Sequences:
>Translated_98_residues MPRPKKCRQLSSCVPCSLFKPNGIPAVKLTHIQLEADEFEALELGDVKRLSQLEAAALMGLSRQTFGYLLANARKKVATA ITQGQALRLPTQTDKDLS >Mature_97_residues PRPKKCRQLSSCVPCSLFKPNGIPAVKLTHIQLEADEFEALELGDVKRLSQLEAAALMGLSRQTFGYLLANARKKVATAI TQGQALRLPTQTDKDLS
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002852 [H]
Pfam domain/function: PF02001 DUF134 [H]
EC number: NA
Molecular weight: Translated: 10738; Mature: 10606
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPKKCRQLSSCVPCSLFKPNGIPAVKLTHIQLEADEFEALELGDVKRLSQLEAAALMG CCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC LSRQTFGYLLANARKKVATAITQGQALRLPTQTDKDLS CCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC >Mature Secondary Structure PRPKKCRQLSSCVPCSLFKPNGIPAVKLTHIQLEADEFEALELGDVKRLSQLEAAALMG CCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEECCCCHHHHHHHHHHHHHC LSRQTFGYLLANARKKVATAITQGQALRLPTQTDKDLS CCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA