| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160873796
Identifier: 160873796
GI number: 160873796
Start: 821436
End: 822611
Strand: Direct
Name: 160873796
Synonym: Sbal195_0674
Alternate gene names: NA
Gene position: 821436-822611 (Clockwise)
Preceding gene: 160873794
Following gene: 160873799
Centisome position: 15.36
GC content: 45.24
Gene sequence:
>1176_bases ATGGAAATTTCAAAAGCAATTATTCTGCCGCTGTTCTGTGTGTTTGTAGTGCCAGTATTATCGGTTTGGTCTGCGCAGGA TGCAGCATGTTCTACACCGGAGGTTTGTTCGATAAAAGTACAGCTGCAAAAAAAACCTGATTATCTACTTCTCAGAGATC TGGCTGAAAAAGGCCCGATGGGACGTGAAGCTGGTTCTGTCGTCGCGGCATTATTGGACCATCCTGATTGGGCTATCAGA GAGAAGGCAGCCAGAGCACTTGGATTTATTGACTATCCAGAGGCAATTCCCTATTTGGGCAAGTTGCTTAATGATCCAGC CAATGCTGTATTAAGTTTGATAGCCGCTGAATCGCTTGGTCGAATCGGAGACCAGCGTGCAATAGACTTTCTTGAGCCAG TTGCAGAATCGCATTGGTTCCCTGCAGTTCGAAATGCTGCGAAAACAGCGATATTCAACATTGAGCATAATCGTCAGTAC CCGAAGCAGCACCCGAATGCCAGTTTCGCTGATGTCTTTTTTGATTATTTGATGGTCGAAAATTACAGTACTCCAAGGCC CAAGTTATGTAGCGAATTGGCAGTTCCCTTTGCGAAGAATAATTTGTTCATAAAACGCTATCAAGATACTGAAAACAGTT CTCTGGCAGCTATTTCATATAGGGTTATCAGTCGTGGCTCCAATTCTTTGGAACAGACAAACCCGGACGCTATAGAGCGT TATACGATAGTTTTGGATGCTTCAAATCAGCTGACCCTGCCAGGAGTTCGATACCCACAAGAGCCAAATGTGGCATTAAA AGTCGGTGGCGGATGGTTGGCAGGCCTTAATCTTGGTGAGTGGGGCGGAGAACTGGTTTTTCTTTCAGACTTGGGGACAT CTTCGCGCATCTTATCAGAGCCAATCGCGGACATTTTTCAATTGGGTAGCAGGAATATTGCCATTACCGATAGAATCGAC GGGTTTGACATCATCTACGAAATAAAGCGCTCTGGCGACAACCAATGGTCGGCAACACCATGGCGGCGATTACCCGATTC TATGTTTGAAGCCAAAATACTTGCAAGCGGTGAGCTAATGGTAAATACGAACGTCGGAAGCCTGCAAATTTCAAGTGATG GCCAGATGCGAATGGCGTCTTGTAAGGCATATTACCCAATCAATGAAGATAAATAA
Upstream 100 bases:
>100_bases CTGAGGTTTGCTTTAGCTTGAGTACAGACTAAAGCTGAATTATCTTATTGTTTTACAATAGATAGCTGGGGTCGTTTTTA ATTGTCTAAATAAGGACATT
Downstream 100 bases:
>100_bases GTGGAGAATTTAACGAGCCATCCATTGTTAAATTTTTATTGTTTTGGACTACTATACCCCGTATAACCATAATGCGCCTT TAGTGAAACCGATAGGAAAA
Product: HEAT repeat-containing PBS lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MEISKAIILPLFCVFVVPVLSVWSAQDAACSTPEVCSIKVQLQKKPDYLLLRDLAEKGPMGREAGSVVAALLDHPDWAIR EKAARALGFIDYPEAIPYLGKLLNDPANAVLSLIAAESLGRIGDQRAIDFLEPVAESHWFPAVRNAAKTAIFNIEHNRQY PKQHPNASFADVFFDYLMVENYSTPRPKLCSELAVPFAKNNLFIKRYQDTENSSLAAISYRVISRGSNSLEQTNPDAIER YTIVLDASNQLTLPGVRYPQEPNVALKVGGGWLAGLNLGEWGGELVFLSDLGTSSRILSEPIADIFQLGSRNIAITDRID GFDIIYEIKRSGDNQWSATPWRRLPDSMFEAKILASGELMVNTNVGSLQISSDGQMRMASCKAYYPINEDK
Sequences:
>Translated_391_residues MEISKAIILPLFCVFVVPVLSVWSAQDAACSTPEVCSIKVQLQKKPDYLLLRDLAEKGPMGREAGSVVAALLDHPDWAIR EKAARALGFIDYPEAIPYLGKLLNDPANAVLSLIAAESLGRIGDQRAIDFLEPVAESHWFPAVRNAAKTAIFNIEHNRQY PKQHPNASFADVFFDYLMVENYSTPRPKLCSELAVPFAKNNLFIKRYQDTENSSLAAISYRVISRGSNSLEQTNPDAIER YTIVLDASNQLTLPGVRYPQEPNVALKVGGGWLAGLNLGEWGGELVFLSDLGTSSRILSEPIADIFQLGSRNIAITDRID GFDIIYEIKRSGDNQWSATPWRRLPDSMFEAKILASGELMVNTNVGSLQISSDGQMRMASCKAYYPINEDK >Mature_391_residues MEISKAIILPLFCVFVVPVLSVWSAQDAACSTPEVCSIKVQLQKKPDYLLLRDLAEKGPMGREAGSVVAALLDHPDWAIR EKAARALGFIDYPEAIPYLGKLLNDPANAVLSLIAAESLGRIGDQRAIDFLEPVAESHWFPAVRNAAKTAIFNIEHNRQY PKQHPNASFADVFFDYLMVENYSTPRPKLCSELAVPFAKNNLFIKRYQDTENSSLAAISYRVISRGSNSLEQTNPDAIER YTIVLDASNQLTLPGVRYPQEPNVALKVGGGWLAGLNLGEWGGELVFLSDLGTSSRILSEPIADIFQLGSRNIAITDRID GFDIIYEIKRSGDNQWSATPWRRLPDSMFEAKILASGELMVNTNVGSLQISSDGQMRMASCKAYYPINEDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43258; Mature: 43258
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISKAIILPLFCVFVVPVLSVWSAQDAACSTPEVCSIKVQLQKKPDYLLLRDLAEKGPM CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCC GREAGSVVAALLDHPDWAIREKAARALGFIDYPEAIPYLGKLLNDPANAVLSLIAAESLG CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RIGDQRAIDFLEPVAESHWFPAVRNAAKTAIFNIEHNRQYPKQHPNASFADVFFDYLMVE HCCCHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC NYSTPRPKLCSELAVPFAKNNLFIKRYQDTENSSLAAISYRVISRGSNSLEQTNPDAIER CCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHCCCCCHHHCCCCHHEE YTIVLDASNQLTLPGVRYPQEPNVALKVGGGWLAGLNLGEWGGELVFLSDLGTSSRILSE EEEEEECCCCEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCCCHHHHHH PIADIFQLGSRNIAITDRIDGFDIIYEIKRSGDNQWSATPWRRLPDSMFEAKILASGELM HHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHHHEEECCEEE VNTNVGSLQISSDGQMRMASCKAYYPINEDK EECCCCEEEECCCCCEEEEECEEECCCCCCC >Mature Secondary Structure MEISKAIILPLFCVFVVPVLSVWSAQDAACSTPEVCSIKVQLQKKPDYLLLRDLAEKGPM CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCC GREAGSVVAALLDHPDWAIREKAARALGFIDYPEAIPYLGKLLNDPANAVLSLIAAESLG CCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH RIGDQRAIDFLEPVAESHWFPAVRNAAKTAIFNIEHNRQYPKQHPNASFADVFFDYLMVE HCCCHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC NYSTPRPKLCSELAVPFAKNNLFIKRYQDTENSSLAAISYRVISRGSNSLEQTNPDAIER CCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEHHHHHCCCCCHHHCCCCHHEE YTIVLDASNQLTLPGVRYPQEPNVALKVGGGWLAGLNLGEWGGELVFLSDLGTSSRILSE EEEEEECCCCEECCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEECCCCCHHHHHH PIADIFQLGSRNIAITDRIDGFDIIYEIKRSGDNQWSATPWRRLPDSMFEAKILASGELM HHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHCCHHHHHHHEEECCEEE VNTNVGSLQISSDGQMRMASCKAYYPINEDK EECCCCEEEECCCCCEEEEECEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA